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07V140M03_2016_Ig8141_scaffold_22143

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_22143_1

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comp(139..1590)
DNA (1452bp) protein (484aa)
glucuronate isomerase (EC:5.3.1.12)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036728FF
Uncharacterized protein {ECO:0000313|EMBL:KKM94681.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_22143_2

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comp(1931..2692)
DNA (762bp) protein (254aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003772832
Marine sediment metagenome DNA, contig: S06H3_S02635 {ECO:0000313|EMBL:GAI20225.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glucosamine/galactosamine-6-phosphate isomerase
07V140M03_2016_Ig8141_scaffold_22143_3
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2847..4562)
DNA (1716bp) protein (572aa)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003761228
ABC transporter inner membrane protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADY12864.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
07V140M03_2016_Ig8141_scaffold_22143_4
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(4563..5690)
DNA (1128bp) protein (376aa)
polyamine-transporting ATPase (EC:3.6.3.31)
Polyamine-transporting ATPase {ECO:0000313|EMBL:ADY12863.1}; EC=3.6.3.31 {ECO:0000313|EMBL:ADY12863.1};; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
ABC transporter Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000361F1A7
07V140M03_2016_Ig8141_scaffold_22143_5

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comp(5947..6924)
DNA (978bp) protein (326aa)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI00037E12CF
Marine sediment metagenome DNA, contig: S01H1_C00156 {ECO:0000313|EMBL:GAF72812.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
extracellular solute-binding protein
07V140M03_2016_Ig8141_scaffold_22143_6

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comp(7204..8034)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003812C58
Marine sediment metagenome DNA, contig: S01H1_C00628 {ECO:0000313|EMBL:GAF80239.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
xylose isomerase domain-containing protein
07V140M03_2016_Ig8141_scaffold_22143_7
S_OP1_64_32, KB1, Bacteria

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comp(8503..9783)
DNA (1281bp) protein (427aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_49_21 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=S_OP1_64_32
07V140M03_2016_Ig8141_scaffold_22143_8
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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comp(9829..10893)
DNA (1065bp) protein (355aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037B4350
oxidoreductase domain-containing protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
07V140M03_2016_Ig8141_scaffold_22143_9
CG_Omnitr_02, Omnitrophica, Bacteria

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comp(10988..12283)
DNA (1296bp) protein (432aa)
Amino-transferase bin=GWF2_Lentisphaerae_49_21 species=Serratia marcescens genus=Serratia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=CG_Omnitr_02
07V140M03_2016_Ig8141_scaffold_22143_10
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12545..13732)
DNA (1188bp) protein (396aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein Tax=Proteiniphilum acetatigenes RepID=UPI000378E228
N-acetylglucosamine-6-phosphate deacetylase
07V140M03_2016_Ig8141_scaffold_22143_11
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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comp(13782..13928)
DNA (147bp) protein (49aa)
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_22143_12

Not on your lists

comp(14102..14857)
DNA (756bp) protein (252aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003665B1D
Marine sediment metagenome DNA, contig: S03H2_S01197 {ECO:0000313|EMBL:GAH61477.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
07V140M03_2016_Ig8141_scaffold_22143_13
CG_Elusi_02, Elusimicrobia, Bacteria

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comp(15204..16223)
DNA (1020bp) protein (340aa)
id=4301585 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=CG_Elusi_02
07V140M03_2016_Ig8141_scaffold_22143_14
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(16452..16778)
DNA (327bp) protein (109aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003609AF5
CpsB_2; mannose-6-phosphate isomerase
Tax=RBG_16_Chloroflexi_64_32_curated
07V140M03_2016_Ig8141_scaffold_22143_15
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(16821..17654)
DNA (834bp) protein (278aa)
sugar ABC transporter permease Tax=Martelella mediterranea RepID=UPI000375A140
Sugar ABC transporter, permease protein
Tax=RBG_16_Armatimonadetes_67_12_curated
07V140M03_2016_Ig8141_scaffold_22143_16
bacterium UASB270, Bacteria

Not on your lists

comp(17657..18559)
DNA (903bp) protein (301aa)
Permease component of ABC-type sugar transporter Tax=Bradyrhizobium sp. YR681 RepID=J3I509_9BRAD
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAK59165.1}; species="Bacteria.;" source="bacterium UASB270.;"
sugar ABC transporter permease
07V140M03_2016_Ig8141_scaffold_22143_17
bacterium UASB270, Bacteria

Not on your lists

comp(18618..19910)
DNA (1293bp) protein (431aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJC1_BRAJP
Bacterial extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:GAK59164.1}; species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
07V140M03_2016_Ig8141_scaffold_22143_18
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(20221..20940)
DNA (720bp) protein (240aa)
Transcriptional regulator bin=GWC2_Spirochaete_52_13 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
GntR family transcriptional regulator
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_22143_19

Not on your lists

comp(21312..21635)
DNA (324bp) protein (108aa)
Xylose isomerase domain-containing protein TIM barrel Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM56_DESK7
Marine sediment metagenome DNA, contig: S06H3_C03008 {ECO:0000313|EMBL:GAH98528.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
xylose isomerase domain-containing protein
Displaying 19 items

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