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07V140M03_2016_Ig8141_scaffold_2563

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_2563_1
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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3..362
DNA (360bp) protein (120aa)
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_2563_trna_5
unknown

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comp(43..116)
DNA (74bp)
transferRNA Arg
07V140M03_2016_Ig8141_scaffold_2563_trna_4
unknown

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comp(132..206)
DNA (75bp)
transferRNA His
07V140M03_2016_Ig8141_scaffold_2563_trna_3
unknown

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comp(227..300)
DNA (74bp)
transferRNA Arg
07V140M03_2016_Ig8141_scaffold_2563_trna_2
unknown

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comp(316..388)
DNA (73bp)
transferRNA Gly
07V140M03_2016_Ig8141_scaffold_2563_trna_1
unknown

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comp(393..466)
DNA (74bp)
transferRNA Pro
07V140M03_2016_Ig8141_scaffold_2563_2

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comp(915..1499)
DNA (585bp) protein (195aa)
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI0003735676
Marine sediment metagenome DNA, contig: S01H4_L00684 {ECO:0000313|EMBL:GAG63519.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
non-canonical purine ntp pyrophosphatase, rdgb/ham1 family
07V140M03_2016_Ig8141_scaffold_2563_3

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comp(1493..2218)
DNA (726bp) protein (242aa)
ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T7G5_THEIA
Marine sediment metagenome DNA, contig: S01H1_C00147 {ECO:0000313|EMBL:GAF72654.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_2563_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(2397..3257)
DNA (861bp) protein (287aa)
Farnesyl-diphosphate synthase Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J3F8_DESRM
polyprenyl synthetase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_2563_5

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comp(3247..3516)
DNA (270bp) protein (90aa)
Exodeoxyribonuclease VII, small subunit Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L171_METHD
Marine sediment metagenome DNA, contig: S01H4_C01494 {ECO:0000313|EMBL:GAG69941.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
exodeoxyribonuclease VII, small subunit
07V140M03_2016_Ig8141_scaffold_2563_6

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comp(3513..3950)
DNA (438bp) protein (146aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Probable exonuclease VII, large subunit Tax=uncultured archaeon RepID=D1JGV0_9ARCH
Marine sediment metagenome DNA, contig: S01H4_C01494 {ECO:0000313|EMBL:GAG69935.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_2563_7

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comp(4623..5045)
DNA (423bp) protein (141aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K1YYK8_9BACT
Marine sediment metagenome DNA, contig: S06H3_S14833 {ECO:0000313|EMBL:GAI43990.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nusB; transcription antitermination protein NusB
07V140M03_2016_Ig8141_scaffold_2563_8

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comp(5074..5508)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFJ4_ALKOO
Marine sediment metagenome DNA, contig: S01H4_C01011 {ECO:0000313|EMBL:GAG60432.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
07V140M03_2016_Ig8141_scaffold_2563_9

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comp(5688..6245)
DNA (558bp) protein (186aa)
Elongation factor P Tax=Thermincola potens (strain JR) RepID=D5X7L0_THEPJ
Marine sediment metagenome DNA, contig: S01H4_C01011 {ECO:0000313|EMBL:GAG60437.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
translation elongation factor P
07V140M03_2016_Ig8141_scaffold_2563_10

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comp(6418..7647)
DNA (1230bp) protein (410aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase Tax=Atribacteria bacterium SCGC AAA255-E04 RepID=UPI0003636769
Marine sediment metagenome DNA, contig: S01H4_C01751 {ECO:0000313|EMBL:GAG72963.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_2563_11

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comp(7827..8510)
DNA (684bp) protein (228aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA255-E04 RepID=UPI0003664BC0
Marine sediment metagenome DNA, contig: S01H4_C00168 {ECO:0000313|EMBL:GAG66435.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
X-Pro dipeptidase
07V140M03_2016_Ig8141_scaffold_2563_12

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comp(8766..9290)
DNA (525bp) protein (175aa)
Marine sediment metagenome DNA, contig: S01H4_C00168 {ECO:0000313|EMBL:GAG66429.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Shikimate kinase bin=GWC2_Deltaproteobacteria_42_51 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
AroK; shikimate kinase
07V140M03_2016_Ig8141_scaffold_2563_13

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comp(9287..10060)
DNA (774bp) protein (258aa)
30S ribosomal protein S12P methylthiotransferase (EC:2.-.-.-)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA255-E04 RepID=UPI00036910C0
Marine sediment metagenome DNA, contig: S01H4_C00168 {ECO:0000313|EMBL:GAG66424.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 18 items

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