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07V140M03_2016_Ig8141_scaffold_12880

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_12880_1

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comp(1..828)
DNA (828bp) protein (276aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036DAB90
Marine sediment metagenome DNA, contig: S01H4_C00422 {ECO:0000313|EMBL:GAG72148.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
07V140M03_2016_Ig8141_scaffold_12880_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(899..1903)
DNA (1005bp) protein (335aa)
tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase / fibronectin/fibrinogen-binding protein (EC:2.1.1.61)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003803BA9
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_12880_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(1893..2360)
DNA (468bp) protein (156aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036486BA
transcriptional regulator
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_12880_4
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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comp(2551..3726)
DNA (1176bp) protein (392aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036AEE4C
major facilitator transporter
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_12880_5
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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comp(4199..6877)
DNA (2679bp) protein (893aa)
Isomaltosyltransferase bin=GWC2_Clostridiales_40_7 species=Sporosarcina globispora genus=Sporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
alpha-glucosidase
Tax=GWC2_Clostridiales_40_7_curated
07V140M03_2016_Ig8141_scaffold_12880_6
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6991..8250)
DNA (1260bp) protein (420aa)
ABC-type sugar transport system, periplasmic component Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EGM4_THECK
sugar ABC transporter substrate-binding protein
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AGA59413.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
07V140M03_2016_Ig8141_scaffold_12880_7
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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comp(8395..9222)
DNA (828bp) protein (276aa)
ABC transporter, permease protein bin=GWC2_Clostridiales_40_7 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
sugar ABC transporter permease
Tax=GWC2_Clostridiales_40_7_curated
07V140M03_2016_Ig8141_scaffold_12880_8
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9212..10099)
DNA (888bp) protein (296aa)
Binding-protein-dependent transport systems inner membrane component bin=GWC2_Clostridiales_40_7 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
sugar ABC transporter permease
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:AGA59412.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
07V140M03_2016_Ig8141_scaffold_12880_9
Bacillus safensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10120..11088)
DNA (969bp) protein (323aa)
Transcriptional regulator Tax=Bacillus pumilus (strain SAFR-032) RepID=A8FC94_BACP2
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KKD42076.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus safensis.;"
07V140M03_2016_Ig8141_scaffold_12880_10
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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11564..13243
DNA (1680bp) protein (560aa)
alpha amylase (EC:3.2.1.10)
Alpha amylase catalytic region {ECO:0000313|EMBL:ACL70998.1}; EC=3.2.1.10 {ECO:0000313|EMBL:ACL70998.1};; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
oligo-1,6-glucosidase Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037E9266
07V140M03_2016_Ig8141_scaffold_12880_11

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comp(13587..15209)
DNA (1623bp) protein (541aa)
Putative uncharacterized protein Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BKY7_THEXL
Marine sediment metagenome DNA, contig: S06H3_L01019 {ECO:0000313|EMBL:GAI16688.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
07V140M03_2016_Ig8141_scaffold_12880_12
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(15594..15902)
DNA (309bp) protein (103aa)
RNAse Z (EC:3.1.26.11)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003739935
Tax=RBG_19FT_COMBO_JS1_35_14_curated
Displaying 12 items

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