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07V140M03_2016_Ig8141_scaffold_39633

Search features with annotation key words

Displaying items 1-30 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t1_biofilm_scaffold_39633_trna_1
unknown

Not on your lists

476..557
DNA (82bp)
transferRNA Leu
07V140M03_2016_Ig8141_scaffold_39633_1
unknown

Not on your lists

comp(1..72)
DNA (72bp) protein (24aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_39633_trna_2
unknown

Not on your lists

comp(558..631)
DNA (74bp)
transferRNA Pro
07V140M03_2016_Ig8141_scaffold_39633_2
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(722..1981)
DNA (1260bp) protein (420aa)
Uncharacterized protein bin=GWC2_Pelobacter_58_13 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
transglycosylase
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_3
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1978..2526)
DNA (549bp) protein (183aa)
Type II secretion system pseudopilin TklG bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
tklG-1; type II secretion system pseudopilin TklG
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_4
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2537..4009)
DNA (1473bp) protein (491aa)
Cysteine--tRNA ligase bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
cysS; cysteinyl-tRNA ligase
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_5
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4113..4868)
DNA (756bp) protein (252aa)
response regulator
Helix-turn-helix transcriptional response regulator, LuxR family bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_6
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4881..6236)
DNA (1356bp) protein (452aa)
Sensor histidine kinase, HAMP domain-containing bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_7
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6329..7801)
DNA (1473bp) protein (491aa)
Sensor histidine kinase, HAMP domain-containing bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
sensor histidine kinase, HAMP domain-containing
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_8
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7802..8473)
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
transcriptional regulator
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_9
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8539..9345)
DNA (807bp) protein (269aa)
phosphate kinase
Putative pyruvate, phosphate dikinase regulatory protein bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_10
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9479..10396
DNA (918bp) protein (306aa)
Ribosomal protein L11 methyltransferase Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=PRMA_PELCD
prmA; 50S ribosomal protein L11 methyltransferase
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_11
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10396..11121
DNA (726bp) protein (242aa)
Ribosomal RNA small subunit methyltransferase E bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
rsmE; 16S rRNA (3-methyl-U1498)-methyltransferase
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_12
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11144..11989
DNA (846bp) protein (282aa)
Ribosomal RNA large subunit methyltransferase J Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XCH2_METSD
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_13
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11962..12429)
DNA (468bp) protein (156aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAS2_GEOUR
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_14
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12562..13866)
DNA (1305bp) protein (435aa)
Amino acid aminotransferase, putative bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
aminotransferase
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_15
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14158..16347)
DNA (2190bp) protein (730aa)
Carboxyl-terminal protease bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
C-terminal processing peptidase-1
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_16
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16534..16788
DNA (255bp) protein (85aa)
ATP synthase-associated magnesium import membrane protein AtpZ Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A8L6_PELCD
atpZ; ATP synthase-associated magnesium import membrane protein AtpZ
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_17
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16811..17158
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZI4_DESAC
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_18
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17162..17857
DNA (696bp) protein (232aa)
ATP synthase subunit a bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
ATP synthase F0F1 subunit A
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_19
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17934..18212
DNA (279bp) protein (93aa)
ATP synthase F0, C subunit Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZI6_DESAC
ATP synthase subunit C
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_20
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18396..19172)
DNA (777bp) protein (259aa)
thiamine biosynthesis protein ThiF
YgdL family protein bin=GWC2_Pelobacter_58_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_21
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19177..19971)
DNA (795bp) protein (265aa)
Magnesium-dependent deoxyribonuclease, TatD family Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A057_PELCD
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_22
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20051..20392
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E8X8_GEOBB
hydrogenase nickel incorporation protein HypA
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_23
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20395..21144
DNA (750bp) protein (250aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI0003638515
hydrogenase nickel incorporation protein HypB
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_24
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21153..23129
DNA (1977bp) protein (659aa)
Sensor histidine kinase, HAMP domain-containing Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E805_GEOBB
HAMP domain-containing sensor histidine kinase
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_25
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23126..24514
DNA (1389bp) protein (463aa)
Sigma-54-dependent transcriptional response regulator Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74EJ9_GEOSL
sigma-54-dependent transcriptional response regulator
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_trna_1
unknown

Not on your lists

comp(24712..24784)
DNA (73bp)
transferRNA Phe
07V140M03_2016_Ig8141_scaffold_39633_26
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24849..26177)
DNA (1329bp) protein (443aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI0003822934
sensor histidine kinase, GAF domain-containing
Tax=BJP_IG2157_Desulfuromonadales_56_134
07V140M03_2016_Ig8141_scaffold_39633_27
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26273..26629)
DNA (357bp) protein (119aa)
Transcriptional regulators, TraR/DksA family bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
TraR/DksA family zinc finger transcriptional regulator
Tax=BJP_IG2157_Desulfuromonadales_56_134
Displaying items 1-30 of 159 in total

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