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Ig9238_scaffold_131542

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_131542_1
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..172
DNA (171bp) protein (57aa)
Elongation factor Tu Tax=Azotobacter vinelandii RepID=C1DKJ8_AZOVD
tuf; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocarbonoclasticus ATCC 49840.;"
Ig9238_scaffold_131542_trna_1
unknown

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188..266
DNA (79bp)
transferRNA Trp
Ig9238_scaffold_131542_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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280..627
DNA (348bp) protein (116aa)
Protein translocase subunit SecE Tax=Nitrosospira sp. APG3 RepID=M5DHT0_9PROT
secE; preprotein translocase subunit SecE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_131542_3
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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629..1162
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB10_NITMU
nusG; transcription antitermination protein NusG
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_131542_4
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1303..1734
DNA (432bp) protein (144aa)
50S ribosomal protein L11 Tax=Burkholderia sp. JPY347 RepID=UPI0003659940
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
Ig9238_scaffold_131542_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1737..2450
DNA (714bp) protein (238aa)
50S ribosomal protein L1 Tax=Sulfuricella denitrificans skB26 RepID=S6B183_9PROT
rplA; 50S ribosomal protein L1
Tax=CG_Hydro_01
Ig9238_scaffold_131542_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2729..3259
DNA (531bp) protein (177aa)
50S ribosomal protein L10 Tax=Methyloversatilis sp. NVD RepID=UPI0003684BC0
rplJ; 50S ribosomal protein L10
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_131542_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3312..3689
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=RL7_BORPD
rplL; 50S ribosomal protein L7/L12
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_131542_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3969..8042
DNA (4074bp) protein (1358aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta Tax=Sulfuricella denitrificans skB26 RepID=S6A9P3_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_131542_9
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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8136..12335
DNA (4200bp) protein (1400aa)
rpoC; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' Tax=Nitrosospira sp. APG3 RepID=M5DR75_9PROT
Tax=CG_Beta_01
Ig9238_scaffold_131542_10
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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12450..12827
DNA (378bp) protein (126aa)
30S ribosomal protein S12 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X8S5_METSD
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium MMS-10A-171.;"
Ig9238_scaffold_131542_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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12883..13353
DNA (471bp) protein (157aa)
30S ribosomal protein S7 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RS7_NITMU
30S ribosomal protein S7
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_131542_12
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13418..15523
DNA (2106bp) protein (702aa)
elongation factor G Tax=Herbaspirillum seropedicae RepID=UPI000313FD04
fusA; translation elongation factor 2 (EF-2/EF-G)
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Ig9238_scaffold_131542_13
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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15542..15682
DNA (141bp) protein (47aa)
tufB; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu Tax=Methylotenera RepID=UPI00035C2D41
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
Displaying 14 items

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