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Ig9238_scaffold_3971

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_3971_1
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1122)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein bin=GWA1_Deltaproteobacteria_52_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
Ig9238_scaffold_3971_2
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1237..2544
DNA (1308bp) protein (436aa)
Uncharacterized protein Tax=Thauera sp. 27 RepID=N6Y330_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO76802.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
hypothetical protein
Ig9238_scaffold_3971_3
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2584..3435)
DNA (852bp) protein (284aa)
Endonuclease/exonuclease/phosphatase Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TKE1_BURSG
endonuclease/exonuclease/phosphatase
Tax=RBG_16_Gallionellales_57_15_curated
Ig9238_scaffold_3971_4
bacterium YEK0313, Bacteria

Not on your lists

comp(3443..4270)
DNA (828bp) protein (276aa)
Glycerol-3-phosphat transport system, permease component Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HVY2_BORPD
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:CEJ11973.1}; species="Bacteria.;" source="bacterium YEK0313.;"
ugpE1; glycerol-3-phosphate transport system permease
Ig9238_scaffold_3971_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4267..5145)
DNA (879bp) protein (293aa)
Binding-protein-dependent transport systems inner membrane component Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDT4_ACIET
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACM34093.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Ig9238_scaffold_3971_6
bacterium YEK0313, Bacteria

Not on your lists

comp(5142..6428)
DNA (1287bp) protein (429aa)
Glycerol-3-phosphate-binding periplasmic protein Tax=Thauera sp. 63 RepID=N6XDB5_9RHOO
sn-glycerol-3-phosphate-binding periplasmic protein UgpB {ECO:0000313|EMBL:CEJ11971.1}; Flags: Precursor;; species="Bacteria.;" source="bacterium YEK0313.;"
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein
Ig9238_scaffold_3971_7
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6460..7413)
DNA (954bp) protein (318aa)
Putative sugar ABC transporter, ATP-binding protein Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HVZ0_BORPD
sugar ABC transporter, ATP-binding protein
Putative sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAP40406.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Ig9238_scaffold_3971_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7536..8984
DNA (1449bp) protein (483aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI0002E1C485
sodium/solute symporter transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_3971_9
unknown

Not on your lists

9138..9377
DNA (240bp) protein (80aa)

This feature has no annotations

Ig9238_scaffold_3971_10
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9374..9895
DNA (522bp) protein (174aa)
Acetyltransferase protein Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QMD2_BRESC
acetyltransferase
Acetyltransferase protein {ECO:0000313|EMBL:ADL02058.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
Ig9238_scaffold_3971_11
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9978..10931
DNA (954bp) protein (318aa)
hypothetical protein Tax=beta proteobacterium L13 RepID=UPI0003773EC6
VanZ family protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_3971_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10957..11265
DNA (309bp) protein (103aa)
ferredoxin Tax=Rhodocyclaceae RepID=UPI00036E147F
putative ferredoxin
Tax=RBG_16_Gamma2_60_9_curated
Ig9238_scaffold_3971_13
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11262..11921
DNA (660bp) protein (220aa)
Alpha/beta hydrolase Tax=Sulfuricella denitrificans skB26 RepID=S6AZS1_9PROT
alpha/beta hydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig9238_scaffold_3971_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11918..12382)
DNA (465bp) protein (155aa)
hypothetical protein Tax=Variovorax paradoxus RepID=UPI000372BCF1
transcriptional regulator, Rrf2 family
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:AGU53001.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Ig9238_scaffold_3971_15
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12457..13227)
DNA (771bp) protein (257aa)
Membrane protein Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7D927_PSEFL
Membrane protein {ECO:0000313|EMBL:KFX70550.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
hypothetical protein
Ig9238_scaffold_3971_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13230..14540)
DNA (1311bp) protein (437aa)
Uncharacterized protein Tax=Azotobacter vinelandii RepID=M9Y457_AZOVI
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Ig9238_scaffold_3971_17
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14838..16979)
DNA (2142bp) protein (714aa)
Thiol:disulfide interchange protein DsbD, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRI6_RHOCS
dsbD; thiol:disulfide interchange protein DsbD
Thiol:disulfide interchange protein DsbD, putative {ECO:0000313|EMBL:ACI98072.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Ig9238_scaffold_3971_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17128..18339
DNA (1212bp) protein (404aa)
23S rRNA (Guanine-N-2-)-methyltransferase rlmL Tax=Nitrosospira sp. APG3 RepID=M5DI71_9PROT
putative RNA methylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_3971_19
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18381..19103
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Polaromonas sp. CF318 RepID=J2TWQ6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL83237.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
Ig9238_scaffold_3971_20
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19166..19654
DNA (489bp) protein (163aa)
sterol-binding protein Tax=Burkholderia oklahomensis RepID=UPI00016A638D
SCP-2 sterol transfer family protein
SCP-2 sterol transfer family protein {ECO:0000313|EMBL:AIO65314.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
Ig9238_scaffold_3971_21
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19762..20799
DNA (1038bp) protein (346aa)
protease Tax=Janthinobacterium sp. CG3 RepID=UPI00034D11A2
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Ig9238_scaffold_3971_22
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20796..22073
DNA (1278bp) protein (426aa)
Putative uncharacterized protein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGV5_THIDA
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Ig9238_scaffold_3971_23
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22094..23716
DNA (1623bp) protein (541aa)
Probable phenylpyruvate decarboxylase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NYJ8_AROAE
pdc; phenylpyruvate decarboxylase
Probable phenylpyruvate decarboxylase {ECO:0000313|EMBL:CAI09866.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
Ig9238_scaffold_3971_24
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23724..25118)
DNA (1395bp) protein (465aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Tax=Sulfuricella denitrificans skB26 RepID=S6A9M0_9PROT
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_3971_25
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25115..26476)
DNA (1362bp) protein (454aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CU91_SIDLE
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:ADE10426.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
Ig9238_scaffold_3971_26
unknown

Not on your lists

comp(26483..26587)
DNA (105bp) protein (35aa)

This feature has no annotations

Ig9238_scaffold_3971_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26808..27440
DNA (633bp) protein (211aa)
Putative uncharacterized protein Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NT33_CHRVO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_3971_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27493..28290)
DNA (798bp) protein (266aa)
Enoyl CoA hydratase Tax=Nitratireductor indicus C115 RepID=K2PQ60_9RHIZ
fadB; enoyl CoA hydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_3971_29
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28287..28616)
DNA (330bp) protein (110aa)
Predicted acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:CAJ96896.1}; EC=5.1.99.- {ECO:0000313|EMBL:CAJ96896.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
Uncharacterized protein Tax=Pseudomonas protegens CHA0 RepID=R4RJG2_9PSED
formyl-CoA transferase
Ig9238_scaffold_3971_30
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28619..29782)
DNA (1164bp) protein (388aa)
acyl-CoA dehydrogenase Tax=Curvibacter lanceolatus RepID=UPI0003666476
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJN07624.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
acyl-CoA dehydrogenase-like protein
Displaying items 1-30 of 32 in total

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