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Ig9238_scaffold_4832

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_4832_1
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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119..4771
DNA (4653bp) protein (1551aa)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:ADE16229.1}; EC=1.4.7.1 {ECO:0000313|EMBL:ADE16229.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
glutamate synthase (ferredoxin) (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZY2_NITHN
Ig9238_scaffold_4832_2
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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4826..6271
DNA (1446bp) protein (482aa)
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:EXI75848.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EXI75848.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
gltD; glutamate synthase small subunit oxidoreductase (EC:1.4.1.13)
dihydropyrimidine dehydrogenase subunit A Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037930E3
Ig9238_scaffold_4832_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6338..7114
DNA (777bp) protein (259aa)
Hydrolase of the alpha/beta superfamily Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SP64_HAHCH
alpha/beta fold family hydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_4832_4
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7161..8249
DNA (1089bp) protein (363aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
uroporphyrinogen decarboxylase Tax=Pandoraea sp. B-6 RepID=UPI00036008C1
uroporphyrinogen decarboxylase
Ig9238_scaffold_4832_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8475..10460
DNA (1986bp) protein (662aa)
Primosomal protein N Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHR1_AZOSU
primosomal protein N''
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_4832_6
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10512..12548)
DNA (2037bp) protein (679aa)
Putative SITE-SPECIFIC RECOMBINASE TRANSMEMBRANE PROTEIN Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R469_CUPTR
site-specific recombinase transmembrane protein
Putative SITE-SPECIFIC RECOMBINASE TRANSMEMBRANE PROTEIN {ECO:0000313|EMBL:CAQ69101.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
Ig9238_scaffold_4832_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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12588..14270
DNA (1683bp) protein (561aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_4832_8
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14271..14942
DNA (672bp) protein (224aa)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI0003601B40
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_4832_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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14955..15644
DNA (690bp) protein (230aa)
Thiol:disulfide interchange protein DsbA bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
DSBA oxidoreductase
Tax=GWE1_Thiobacillus_62_9_curated
Ig9238_scaffold_4832_10
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15685..16440
DNA (756bp) protein (252aa)
short-chain dehydrogenase Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003622DFE
short chain dehydrogenase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig9238_scaffold_4832_11
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(16500..17360)
DNA (861bp) protein (287aa)
OmpA/MotB domain-containing protein bin=RBG_16_Aminicenantes_66_30 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
OmpA/MotB domain-containing protein
Tax=RBG_13_Aminicenantes_63_10_curated
Ig9238_scaffold_4832_12
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17674..18480)
DNA (807bp) protein (269aa)
Binding-protein-dependent transport systems inner membrane component Tax=Burkholderia sp. RPE64 RepID=R4WR10_9BURK
ABC transporter permease {ECO:0000313|EMBL:KDR30016.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
binding-protein-dependent transport systems inner membrane component
Ig9238_scaffold_4832_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18483..19295)
DNA (813bp) protein (271aa)
h16_A2382; ABC transporter ATPase (EC:3.6.3.-)
mannosyltransferase Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037202D8
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_4832_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19378..20406)
DNA (1029bp) protein (343aa)
ABC transporter substrate-binding protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002F9F9AC
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR79219.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
tauA; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
Ig9238_scaffold_4832_15
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20451..21155)
DNA (705bp) protein (235aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002F350D4
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_57_12_curated
Ig9238_scaffold_4832_16
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21159..22094)
DNA (936bp) protein (312aa)
Pyruvate carboxyltransferase Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TA12_BURPP
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ACD21264.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
Ig9238_scaffold_4832_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22154..24904
DNA (2751bp) protein (917aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Phosphoenolpyruvate carboxylase Tax=Nitrosospira sp. APG3 RepID=M5DH56_9PROT
ppc; phosphoenolpyruvate carboxylase
Ig9238_scaffold_4832_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24982..26184)
DNA (1203bp) protein (401aa)
Formyl-CoA transferase Tax=Thauera phenylacetica B4P RepID=N6YRR8_9RHOO
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_4832_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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26324..26689
DNA (366bp) protein (122aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI000306EE0C
glutaredoxin
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Ig9238_scaffold_4832_20
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26699..27292)
DNA (594bp) protein (198aa)
YecA family protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) PF3_AZOSU">RepID=G8QPF3_AZOSU
yecA family protein
YecA family protein {ECO:0000313|EMBL:AEV27054.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Ig9238_scaffold_4832_21
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27428..28153)
DNA (726bp) protein (242aa)
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AHX13309.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Nitroreductase bin=GWF2_Lentisphaerae_57_35 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Ig9238_scaffold_4832_22
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28271..29986)
DNA (1716bp) protein (572aa)
Peptidase M14 carboxypeptidase A Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGU9_HALO1
peptidase M14 carboxypeptidase A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Ig9238_scaffold_4832_23
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30183..31304)
DNA (1122bp) protein (374aa)
Mandelate racemase/muconate lactonizing protein Tax=Acidocella sp. MX-AZ02 RepID=K5ZFL4_9PROT
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EKM98395.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
Mandelate racemase/muconate lactonizing protein
Ig9238_scaffold_4832_24
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31322..32338)
DNA (1017bp) protein (339aa)
Uncharacterized protein Tax=Cupriavidus basilensis OR16 RepID=H1S4H8_9BURK
Tricarboxylate transport protein TctC
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24295.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
Ig9238_scaffold_4832_25
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32649..33386)
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFL5_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG75142.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
Ig9238_scaffold_4832_26
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33383..34171)
DNA (789bp) protein (263aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B36361
Uncharacterized protein {ECO:0000313|EMBL:KHL24802.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
Ig9238_scaffold_4832_27
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(34168..36102)
DNA (1935bp) protein (645aa)
Uncharacterized protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFL7_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG75144.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
Ig9238_scaffold_4832_28
unknown

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comp(36312..36503)
DNA (192bp) protein (64aa)

This feature has no annotations

Ig9238_scaffold_4832_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(36521..37732)
DNA (1212bp) protein (404aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
predicted ATPase AAA+ superfamily
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ig9238_scaffold_4832_30
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37890..38819)
DNA (930bp) protein (310aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SF18_METPP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Displaying items 1-30 of 152 in total

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