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Ig9238_scaffold_14267

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_14267_trna_1
unknown

Not on your lists

comp(4..77)
DNA (74bp)
transferRNA Arg
Ig9238_scaffold_14267_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206..739
DNA (534bp) protein (178aa)
Cytochrome c, class I Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCK8_NITMU
cytochrome c, class I
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_14267_2
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

805..1626
DNA (822bp) protein (274aa)
apaH; diadenosine tetraphosphatase (EC:3.6.1.41)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RP82_ACCPU
Tax=GWA2_Rhodocyclales_65_20_curated
Ig9238_scaffold_14267_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1761..3053)
DNA (1293bp) protein (431aa)
pfkB; carbohydrate kinase (EC:2.7.1.-)
sugar kinase Tax=Azoarcus toluclasticus RepID=UPI00037DE550
Tax=CG_Rhodocyc_01
Ig9238_scaffold_14267_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3168..4001)
DNA (834bp) protein (278aa)
MJ0042 family finger-like protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPT8_SIDLE
MJ0042 family finger-like protein
Tax=CG_Rhodocyc_01
Ig9238_scaffold_14267_5
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4004..4600)
DNA (597bp) protein (199aa)
Ribosomal protein L11 methyltransferase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPT7_SIDLE
ribosomal protein L11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig9238_scaffold_14267_6
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4820..6184)
DNA (1365bp) protein (455aa)
Acetyl-CoA carboxylase, biotin carboxylase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPT6_SIDLE
acetyl-CoA carboxylase, biotin carboxylase
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ADE13081.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
Ig9238_scaffold_14267_7
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6232..6669)
DNA (438bp) protein (146aa)
acetyl-CoA carboxylase Tax=Methyloversatilis universalis RepID=UPI000372E7B1
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Tax=GWA2_Gallionellales_60_142_curated
Ig9238_scaffold_14267_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6694..7143)
DNA (450bp) protein (150aa)
3-dehydroquinate dehydratase, type II (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
3-dehydroquinate dehydratase Tax=Aquaspirillum serpens RepID=UPI0003B5A26A
Ig9238_scaffold_14267_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7335..7880)
DNA (546bp) protein (182aa)
Thioredoxin Tax=Sulfuricella denitrificans skB26 RepID=S6B845_9PROT
thioredoxin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_14267_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7877..8395)
DNA (519bp) protein (173aa)
Thiol:disulfide interchange protein DsbD {ECO:0000256|HAMAP-Rule:MF_00399}; EC=1.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00399};; Protein-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_00399}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Thiol:disulfide interchange protein DsbD Tax=Dechloromonas aromatica (strain RCB) RepID=Q477T8_DECAR
cytochrome c biogenesis protein, transmembrane region
Ig9238_scaffold_14267_11
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8392..8733)
DNA (342bp) protein (114aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00036037FC
cutA; divalent cation tolerance protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
Ig9238_scaffold_14267_12
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8810..9196
DNA (387bp) protein (129aa)
FxsA cytoplasmic membrane protein Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WYU6_METML
FxsA cytoplasmic membrane protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
Ig9238_scaffold_14267_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9285..10328
DNA (1044bp) protein (348aa)
hypothetical protein Tax=Leeia oryzae RepID=UPI00035E43A2
CDP-6-deoxy-delta-3,4-glucoseen reductase {ECO:0000313|EMBL:KIO48809.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
oxidoreductase FAD/NAD(P)-binding domain containing protein
Ig9238_scaffold_14267_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10345..10923)
DNA (579bp) protein (193aa)
Uncharacterized protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7B3_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75358.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Ig9238_scaffold_14267_15
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10967..13120)
DNA (2154bp) protein (718aa)
HemY domain protein Tax=Sulfuricella denitrificans skB26 RepID=S6ANW5_9PROT
HemY domain protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_14267_16
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13117..13809)
DNA (693bp) protein (231aa)
Uroporphyrinogen III synthase Tax=Azoarcus sp. KH32C RepID=H0PXQ8_9RHOO
hemD; uroporphyrinogen III synthase
Uroporphyrinogen III synthase {ECO:0000313|EMBL:BAL23250.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Ig9238_scaffold_14267_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13806..14693)
DNA (888bp) protein (296aa)
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000255|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000255|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000255|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000255|HAMAP-Rule:MF_00260}; Short=HMBS {ECO:0000255|HAMAP-Rule:MF_00260};; Pre-uroporphyrinogen synthase {ECO:0000255|HAMAP-Rule:MF_00260}; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Porphobilinogen deaminase Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=HEM3_THIDA
Ig9238_scaffold_14267_18
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14850..16229)
DNA (1380bp) protein (460aa)
Ammonium transporter Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2V3_ACIAP
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Ig9238_scaffold_14267_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16249..16587)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH81_AZOSU
nitrogen regulatory protein PII
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_14267_20
CG_Gallio_02, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16643..17413)
DNA (771bp) protein (257aa)
hypothetical protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000373CACD
hypothetical protein
Tax=CG_Gallio_02
Ig9238_scaffold_14267_21
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17628..17870
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Thauera RepID=C4ZMV7_THASP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENO78282.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
Displaying 22 items

View Taxonomy