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Ig9238_scaffold_53053

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_53053_1
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..509
DNA (507bp) protein (169aa)
hypothetical protein Tax=Rhodocyclaceae RepID=UPI0003820436
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
ECF subfamilyRNA polymerase sigma-70 factor
Ig9238_scaffold_53053_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

538..1215
DNA (678bp) protein (226aa)
Putative uncharacterized protein Tax=Methyloversatilis universalis FAM5 RepID=F5R7N1_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_53053_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1461..2993
DNA (1533bp) protein (511aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI000381AC08
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_53053_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3060..3425
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DI31_9PROT
cytochrome c domain containing protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_53053_5
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3468..4943
DNA (1476bp) protein (492aa)
Polyphosphate:AMP phosphotransferase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPP9_AZOSU
polyphosphate:AMP phosphotransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Ig9238_scaffold_53053_6
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4951..6459
DNA (1509bp) protein (503aa)
Putative transcriptional regulator, Crp/Fnr family Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFY1_GALCS
Crp family transcriptional regulator
Tax=GWA2_Gallionellales_59_43_curated
Ig9238_scaffold_53053_7
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6515..6910)
DNA (396bp) protein (132aa)
Sensor histidine kinase Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EJ5_DECAR
sensor histidine kinase
Tax=BJP_08E140C01_Dechloromonas_61_78
Ig9238_scaffold_53053_8
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7005..7460
DNA (456bp) protein (152aa)
Putative uncharacterized protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EJ4_DECAR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Ig9238_scaffold_53053_9
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7474..8076
DNA (603bp) protein (201aa)
OmpA/MotB domain protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIR6_ACCPU
OmpA/MotB domain-containing protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
Ig9238_scaffold_53053_10
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8063..10114)
DNA (2052bp) protein (684aa)
Putative chase2 sensor protein Tax=Janthinobacterium sp. HH01 RepID=L9PD84_9BURK
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:KEA62171.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacterium sp. AK27.;"
stage II sporulation E family protein
Ig9238_scaffold_53053_11
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10126..11088)
DNA (963bp) protein (321aa)
Metallo-beta-lactamase family protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EJ1_DECAR
beta-lactamase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Ig9238_scaffold_53053_12
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11095..11469)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037EF03B
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
anti-anti-sigma regulatory factor, SpoIIAA
Ig9238_scaffold_53053_13
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11754..12752
DNA (999bp) protein (333aa)
ferredoxin Tax=Bacillus massiliosenegalensis RepID=UPI0002F1CBDD
pyruvate/ketoisovalerate oxidoreductase subunit gamma
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig9238_scaffold_53053_14
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12763..14994
DNA (2232bp) protein (744aa)
Pyruvate ferredoxin oxidoreductase alpha-beta subunit Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JA6_SYMTH
pyruvate ferredoxin oxidoreductase alpha-beta subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig9238_scaffold_53053_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15008..15856
DNA (849bp) protein (283aa)
NfnB Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VPN9_CLOSH
oxidoreductase FAD/NAD(P)-binding domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_53053_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15856..17259
DNA (1404bp) protein (468aa)
Glutamate synthase (NADPH), homotetrameric Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R9H1_9THEO
glutamate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_53053_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17256..17825)
DNA (570bp) protein (190aa)
Rubrerythrin Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13AX2_RHOPS
rubrerythrin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_53053_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18383..19075)
DNA (693bp) protein (231aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_53053_trna_1
unknown

Not on your lists

comp(19197..19269)
DNA (73bp)
transferRNA Phe
Ig9238_scaffold_53053_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19235..22390)
DNA (3156bp) protein (1052aa)
hypothetical protein Tax=Janthinobacterium sp. CG3 RepID=UPI00034692A1
ankyrin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_53053_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22512..23897)
DNA (1386bp) protein (462aa)
nuoN; NADH-quinone oxidoreductase chain N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
NADH-quinone oxidoreductase subunit N Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB26_GEMAT
Ig9238_scaffold_53053_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23894..25462)
DNA (1569bp) protein (523aa)
nuoM; NADH-quinone oxidoreductase chain M (EC:1.6.99.5)
NADH-quinone oxidoreductase chain M {ECO:0000313|EMBL:BAH39433.1}; EC=1.6.99.5 {ECO:0000313|EMBL:BAH39433.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
NADH-quinone oxidoreductase chain M Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB27_GEMAT
Ig9238_scaffold_53053_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25455..27332)
DNA (1878bp) protein (626aa)
nuoL; NADH-quinone oxidoreductase chain L (EC:1.6.99.5)
NADH-quinone oxidoreductase chain L {ECO:0000313|EMBL:BAH39434.1}; EC=1.6.99.5 {ECO:0000313|EMBL:BAH39434.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
NADH-quinone oxidoreductase chain L Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB28_GEMAT
Displaying 23 items

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