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Ig9238_scaffold_68468

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_68468_1
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15..749
DNA (735bp) protein (245aa)
gltL; glutamate/aspartate transport ATP-binding protein gltL (EC:3.6.3.21)
Glutamate/aspartate transport ATP-binding protein gltL Tax=Collimonas fungivorans (strain Ter331) RepID=G0AF74_COLFT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Ig9238_scaffold_68468_2
unknown

Not on your lists

854..1936
DNA (1083bp) protein (361aa)

This feature has no annotations

Ig9238_scaffold_68468_3
RIFOXYD2_FULL_Sideroxydans_59_7_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1951..2256
DNA (306bp) protein (102aa)
UPF0235 protein AZKH_3845 Tax=Azoarcus sp. KH32C RepID=H0PT87_9RHOO
hypothetical protein
Tax=RIFOXYD2_FULL_Sideroxydans_59_7_curated
Ig9238_scaffold_68468_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2264..3184)
DNA (921bp) protein (307aa)
Histone deacetylase Tax=Sulfuricella denitrificans skB26 RepID=S6AM13_9PROT
Deacetylase {ECO:0000313|EMBL:GAO37601.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
histone deacetylase
Ig9238_scaffold_68468_5
unknown

Not on your lists

comp(3199..3843)
DNA (645bp) protein (215aa)

This feature has no annotations

Ig9238_scaffold_68468_6
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3916..4857
DNA (942bp) protein (314aa)
Methanol dehydrogenase regulatory protein MoxR Tax=Sulfuricella denitrificans skB26 RepID=S6AGH1_9PROT
methanol dehydrogenase regulatory protein MoxR
ATPase AAA {ECO:0000313|EMBL:GAO37540.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Ig9238_scaffold_68468_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4872..5831
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AA24_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_68468_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5873..7801
DNA (1929bp) protein (643aa)
Transglutaminase Tax=Sulfuricella denitrificans skB26 RepID=S6AKI4_9PROT
transglutaminase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_68468_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7806..8741)
DNA (936bp) protein (312aa)
Conserved hypothetical lipoprotein Tax=Azoarcus sp. (strain BH72) RepID=A1K4F1_AZOSB
nlpD; lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Ig9238_scaffold_68468_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8749..9378)
DNA (630bp) protein (210aa)
hypothetical protein Tax=Methylophilus methylotrophus RepID=UPI000367AD79
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_68468_11
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9434..10177)
DNA (744bp) protein (248aa)
5'-nucleotidase SurE Tax=Sulfuricella denitrificans skB26 RepID=S6AG50_9PROT
surE; stationary phase survival protein SurE
Tax=BJP_IG2103_Dechloromonas_60_92
Ig9238_scaffold_68468_12
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10355..11398
DNA (1044bp) protein (348aa)
FadE36, possible aminoglycoside phosphotransferase Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MGD7_PSEPS
FadE36, possible aminoglycoside phosphotransferase {ECO:0000313|EMBL:ELS25839.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
FadE36, aminoglycoside phosphotransferase
Ig9238_scaffold_68468_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11395..11790
DNA (396bp) protein (132aa)
Putative uncharacterized protein Tax=Pseudomonas putida (strain KT2440) RepID=Q88J57_PSEPK
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_68468_14
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11787..12560
DNA (774bp) protein (258aa)
2-deoxy-D-gluconate 3-dehydrogenase Tax=Achromobacter xylosoxidans AXX-A RepID=F7SZV4_ALCXX
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:KGE01766.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
2-deoxy-D-gluconate 3-dehydrogenase
Ig9238_scaffold_68468_15
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12570..13766
DNA (1197bp) protein (399aa)
Putative acyl-CoA dehydrogenase Tax=Azospirillum brasilense Sp245 RepID=G8AMA6_AZOBR
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Ig9238_scaffold_68468_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13757..14449
DNA (693bp) protein (231aa)
Flagellar brake protein YcgR bin=GWE2_Gallionellales_58_10 species=Burkholderia glumae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
YcgR family protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_68468_17
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14446..17337)
DNA (2892bp) protein (964aa)
Glycine dehydrogenase (decarboxylating) Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=GCSP_BURM1
glycine dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_68468_18
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17347..17727)
DNA (381bp) protein (127aa)
glycine cleavage system protein H Tax=Azoarcus toluclasticus RepID=UPI00037155BB
gcvH; glycine cleavage system H protein
Tax=GWA2_Rhodocyclales_65_20_curated
Ig9238_scaffold_68468_19
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17784..18866)
DNA (1083bp) protein (361aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
glycine cleavage system protein T Tax=Cupriavidus sp. WS RepID=UPI00035D45B8
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_68468_20
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19381..21027
DNA (1647bp) protein (549aa)
malate dehydrogenase (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=bin5_DeltaP organism_group=Deltaproteobacteria
maeA_[H]; NAD-dependent malic enzyme (EC:1.1.1.38)
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_68468_21
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21036..21728)
DNA (693bp) protein (231aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
SdhB succinate dehydrogenase (Iron-sulfur subunit) oxidoreductase protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82SG7_NITEU
Ig9238_scaffold_68468_22
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21754..22095)
DNA (342bp) protein (114aa)
succinate dehydrogenase Tax=Thioalkalivibrio RepID=UPI000376140E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48643.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Ig9238_scaffold_68468_23
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22089..22487)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Thauera terpenica 58Eu RepID=S9ZMN6_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48644.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Ig9238_scaffold_68468_24
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22465..22662)
DNA (198bp) protein (66aa)
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
Ig9238_scaffold_68468_25
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22659..22922)
DNA (264bp) protein (88aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI00036D74AA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV84822.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
Ig9238_scaffold_68468_26
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23165..23764)
DNA (600bp) protein (200aa)
IclR family transcriptional regulator Tax=Methylobacter marinus RepID=UPI00036E4435
uracil-DNA glycosylase superfamily protein
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ABD71827.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_68468_27
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23795..24133)
DNA (339bp) protein (113aa)
FeS assembly SUF system protein Tax=Novosphingobium sp. B-7 RepID=UPI0003B5CE96
putative metal-sulfur cluster biosynthetic enzyme
FeS assembly SUF system protein {ECO:0000313|EMBL:KEY99184.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. BHC-A.;"
Ig9238_scaffold_68468_28
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24133..24591)
DNA (459bp) protein (153aa)
nitrogen fixation protein NifU Tax=Burkholderia sp. WSM4176 RepID=UPI00036E64EF
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EUC12190.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
SUF system FeS assembly protein, NifU family
Ig9238_scaffold_68468_29
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24588..25841)
DNA (1254bp) protein (418aa)
cysteine desulfurase Tax=Burkholderia sp. JPY251 RepID=UPI0003778507
cysteine desulfurase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Ig9238_scaffold_68468_30
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25838..27169)
DNA (1332bp) protein (444aa)
FeS assembly protein SufD Tax=Cupriavidus basilensis OR16 RepID=H1SDB3_9BURK
FeS assembly protein SufD
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Displaying items 1-30 of 31 in total

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