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Ig9238_scaffold_23564

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_23564_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..669)
DNA (669bp) protein (223aa)
L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MM7_MESSB
polar amino acid ABC transporter, inner membrane subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_23564_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(669..1436)
DNA (768bp) protein (256aa)
glutamate ABC transporter permease Tax=Janthinobacterium sp. CG3 RepID=UPI0003498E24
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_23564_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1499..2386)
DNA (888bp) protein (296aa)
Glutamate/aspartate ABC transporter, periplasmic substrate-binding protein Tax=Roseovarius sp. TM1035 RepID=A6E4U0_9RHOB
amino acid ABC transporter periplasmic amino acid-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_23564_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2542..3189)
DNA (648bp) protein (216aa)
Aspartate racemase {ECO:0000313|EMBL:ENZ82303.1}; EC=5.1.1.13 {ECO:0000313|EMBL:ENZ82303.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
Aspartate racemase Tax=Caulobacter crescentus OR37 RepID=R0EA00_CAUCE
murI; aspartate racemase
Ig9238_scaffold_23564_5
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3237..7958
DNA (4722bp) protein (1574aa)
glutamate dehydrogenase (EC:1.4.1.2)
Glutamate dehydrogenase (NAD) {ECO:0000313|EMBL:ABE44934.1}; EC=1.4.1.2 {ECO:0000313|EMBL:ABE44934.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Glutamate dehydrogenase (NAD) Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128V8_POLSJ
Ig9238_scaffold_23564_6
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7951..9141
DNA (1191bp) protein (397aa)
Major facilitator superfamily MFS_1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDL4_RALP1
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS61949.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
Ig9238_scaffold_23564_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9288..9659)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6E7_9NEIS
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_23564_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9702..9983)
DNA (282bp) protein (94aa)
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig9238_scaffold_23564_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9997..10251)
DNA (255bp) protein (85aa)
ThiamineS protein bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
Ig9238_scaffold_23564_10
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10259..11512)
DNA (1254bp) protein (418aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK74_ACCPU
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACV33665.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Ig9238_scaffold_23564_11
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11528..13387)
DNA (1860bp) protein (620aa)
Aldehyde ferredoxin oxidoreductase Tax=Thiomonas RepID=D5X670_THIK1
aorA; aldehyde ferredoxin oxidoreductase
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:BAO29916.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig9238_scaffold_23564_12
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13400..13885)
DNA (486bp) protein (162aa)
4Fe-4S ferredoxin Tax=Ralstonia sp. PBA RepID=I9BT06_9RALS
4Fe-4S ferredoxin {ECO:0000313|EMBL:EIZ02846.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
4Fe-4S ferredoxin
Ig9238_scaffold_23564_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14076..15176)
DNA (1101bp) protein (367aa)
ABC transporter substrate-binding protein Tax=Hydrogenophaga sp. PBC RepID=I4MIJ8_9BURK
extracellular ligand-binding receptor
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_23564_14
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15408..16148)
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6QW39_9ZZZZ
putative reprotein translocase SecA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_23564_15
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16408..16833)
DNA (426bp) protein (142aa)
Preprotein translocase subunit SecB Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HNY0_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_23564_16
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16888..17298)
DNA (411bp) protein (137aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00036A18E7
PilT protein domain protein
Ig9238_scaffold_23564_17
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17295..17537)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y9G9_THIV6
Uncharacterized protein {ECO:0000313|EMBL:CDS48432.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
hypothetical protein
Ig9238_scaffold_23564_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17925..19112
DNA (1188bp) protein (396aa)
aspartate aminotransferase Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000379CB1B
aspartate/tyrosine/aromatic aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_23564_19
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19396..20667
DNA (1272bp) protein (424aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Nitrosospira sp. APG3 RepID=M5DJ63_9PROT
Ig9238_scaffold_23564_20
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20753..22168
DNA (1416bp) protein (472aa)
threonine synthase (EC:4.2.3.1)
L-threonine synthase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8R8_NITMU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_23564_21
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22307..23005)
DNA (699bp) protein (233aa)
Surface lipoprotein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QN11_AZOSU
surface lipoprotein
Surface lipoprotein {ECO:0000313|EMBL:AEV25796.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Ig9238_scaffold_23564_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23002..23862)
DNA (861bp) protein (287aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase Tax=Thauera RepID=C4K9U7_THASP
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_23564_23
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23895..26477
DNA (2583bp) protein (861aa)
ClpB protein Tax=Nitrosospira sp. APG3 RepID=M5DKM3_9PROT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ATPase with chaperone activity
Displaying 23 items

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