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Ig9238_scaffold_23912

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_23912_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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120..527
DNA (408bp) protein (136aa)
Integrase, catalytic region Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128U0_POLSJ
integrase catalytic subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_23912_2
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(614..2398)
DNA (1785bp) protein (595aa)
Probable outer membrane receptor protein Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D6G6_LARHH
outer membrane receptor protein
Probable outer membrane receptor protein {ECO:0000313|EMBL:ACO76201.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
Ig9238_scaffold_23912_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2739..2939
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFD1_AZOSU
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_23912_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2936..3274
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6B8F9_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_23912_5
unknown

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3504..3650
DNA (147bp) protein (49aa)
hypothetical protein
Ig9238_scaffold_23912_6
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3640..4443
DNA (804bp) protein (268aa)
Uncharacterized protein Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6ZEZ9_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO90729.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein
Ig9238_scaffold_23912_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4516..5892
DNA (1377bp) protein (459aa)
TrkA-N domain protein bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
trkA; potassium transporter peripheral membrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_23912_8
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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5896..7419
DNA (1524bp) protein (508aa)
cation transporter
cation transporter; K03498 trk system potassium uptake protein TrkH bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_23912_9
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7394..8647)
DNA (1254bp) protein (418aa)
Lipid A core-O-antigen ligase-like enyme Tax=Burkholderia sp. Ch1-1 RepID=I2IP05_9BURK
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:EIF32457.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
O-antigen ligase like membrane family protein
Ig9238_scaffold_23912_10
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8664..9794)
DNA (1131bp) protein (377aa)
Putative succinyl-diaminopimelate desuccinylase Tax=Marinobacter sp. BSs20148 RepID=M1F6B3_9ALTE
dapE; succinyl-diaminopimelate desuccinylase
Putative succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:AFP29021.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. BSs20148.;"
Ig9238_scaffold_23912_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9811..10557)
DNA (747bp) protein (249aa)
TerC family integral membrane protein Tax=Magnetospirillum gryphiswaldense RepID=A4U0M6_9PROT
TerC family integral membrane protein {ECO:0000313|EMBL:CAM76433.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
ygdQ; conserved hypothetical protein; putative inner membrane protein
Ig9238_scaffold_23912_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11808..11954
DNA (147bp) protein (49aa)
IS4 family transposase bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
IS4 family transposase
Transposase, IS4 family {ECO:0000313|EMBL:ABE47276.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Displaying 12 items

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