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Ig9238_scaffold_27889

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_27889_1
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..375)
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6QPT4_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_27889_2
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421..942)
DNA (522bp) protein (174aa)
Uncharacterized protein Tax=Methyloglobulus morosus KoM1 RepID=V5BMI6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EXI71415.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein
Ig9238_scaffold_27889_3
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1044..2234)
DNA (1191bp) protein (397aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZNP1_9BACT
AAA ATPase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig9238_scaffold_27889_4
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2470..3201)
DNA (732bp) protein (244aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI00037A3CC7
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Ig9238_scaffold_27889_5
unknown

Not on your lists

comp(3198..3338)
DNA (141bp) protein (47aa)

This feature has no annotations

Ig9238_scaffold_27889_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3850..5115)
DNA (1266bp) protein (422aa)
Uncharacterized protein Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4WM40_PSEAI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_27889_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5105..5440)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Verminephrobacter aporrectodeae RepID=UPI000237822A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_27889_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5700..6500)
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Thiothrix nivea DSM 5205 RepID=I3BSH1_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_27889_9
unknown

Not on your lists

comp(7114..7335)
DNA (222bp) protein (74aa)

This feature has no annotations

Ig9238_scaffold_27889_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7533..8270)
DNA (738bp) protein (246aa)
Surfeit locus 1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJE4_9PROT
surfeit locus 1
Tax=CG_Rhodof_02
Ig9238_scaffold_27889_11
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8622..8825
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6B7P8_9PROT
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
Ig9238_scaffold_27889_12
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8855..9703)
DNA (849bp) protein (283aa)
Cytochrome c oxidase subunit III Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RP97_ACCPU
cytochrome c oxidase subunit III
Tax=CG_Rhodof_01
Ig9238_scaffold_27889_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9744..10310)
DNA (567bp) protein (189aa)
Cytochrome c oxidase assembly protein CtaG/Cox11 bin=GWE2_Gallionellales_58_10 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
cytochrome c oxidase assembly protein CtaG/Cox11
Tax=CG_Rhodof_04
Ig9238_scaffold_27889_14
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10451..12046)
DNA (1596bp) protein (532aa)
cytochrome c oxidase subunit I (EC:1.9.3.1)
cytochrome oxidase subunit I Tax=Methylophilus RepID=UPI00035EF179
Tax=CG_Rhodof_03
Ig9238_scaffold_27889_15
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12083..13243)
DNA (1161bp) protein (387aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Cytochrome c oxidase subunit 2 Tax=Sulfuricella denitrificans skB26 RepID=S6AJE7_9PROT
Ig9238_scaffold_27889_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13300..13689)
DNA (390bp) protein (130aa)
Cytochrome c oxidase subunit 2 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCN0_NITMU
cytochrome c oxidase subunit II
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_27889_17
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14048..14665)
DNA (618bp) protein (206aa)
Methyltransferase type 12 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SI1_RHOFD
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_27889_18
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14865..15344
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS62923.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Ig9238_scaffold_27889_19
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

15520..16506
DNA (987bp) protein (329aa)
hypothetical protein Tax=Meiothermus timidus RepID=UPI000369B517
mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
2,3-diketo-5-methylthiopentyl-1-phosphate enolase {ECO:0000313|EMBL:BAM00741.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Ig9238_scaffold_27889_20
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

16517..16963
DNA (447bp) protein (149aa)
Cupin 2 conserved barrel domain protein Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BHZ0_MEISD
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADH62264.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
Ig9238_scaffold_27889_21
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16940..17860)
DNA (921bp) protein (307aa)
gluconolactonase (EC:3.1.1.17)
Gluconolactonase {ECO:0000313|EMBL:ABE46398.1}; EC=3.1.1.17 {ECO:0000313|EMBL:ABE46398.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Gluconolactonase Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122Z4_POLSJ
Ig9238_scaffold_27889_22
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17887..18864)
DNA (978bp) protein (326aa)
Uncharacterized protein UPF0065 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122Z3_POLSJ
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABE46399.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Ig9238_scaffold_27889_23
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18890..20032)
DNA (1143bp) protein (381aa)
III protein, CoA-transferase family Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZV68_9PROT
III protein, CoA-transferase family {ECO:0000313|EMBL:EHM03129.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
Ig9238_scaffold_27889_24
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20029..20964)
DNA (936bp) protein (312aa)
Putative hydroxymethylglutaryl-CoA lyase Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZV69_9PROT
Putative hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EHM03130.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hmgL; 3-hydroxy-3-methylglutaryl-CoA lyase
Ig9238_scaffold_27889_25
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21070..21780
DNA (711bp) protein (237aa)
IclR family transcriptional regulator Tax=Cupriavidus sp. HPC(L) RepID=V2JWH4_9BURK
IclR family transcriptional regulator {ECO:0000313|EMBL:ESJ18478.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
IclR family transcriptional regulator
Ig9238_scaffold_27889_26
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21804..22535)
DNA (732bp) protein (244aa)
hypothetical protein Tax=Curvibacter lanceolatus RepID=UPI00035CFD6B
LrgB family protein
LrgB family protein {ECO:0000313|EMBL:AGG33240.1}; species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
Ig9238_scaffold_27889_27
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22532..22876)
DNA (345bp) protein (115aa)
LrgA family protein Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WYM6_METML
LrgA family protein
LrgA family protein {ECO:0000313|EMBL:ACT47001.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
Ig9238_scaffold_27889_28
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22883..23584)
DNA (702bp) protein (234aa)
demethylmenaquinone methyltransferase Tax=Herbaspirillum sp. JC206 RepID=UPI0002ECECA2
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:EHL98739.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
Ig9238_scaffold_27889_29
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23584..24528)
DNA (945bp) protein (315aa)
Dihydrodipicolinate synthase-like protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZ82_RAMTT
dihydrodipicolinate synthase
Tax=GWA2_Curvibacter_64_110_curated
Ig9238_scaffold_27889_30
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24562..26169)
DNA (1608bp) protein (536aa)
Type III restriction protein res subunit Tax=mine drainage metagenome RepID=T1CEJ4_9ZZZZ
type III restriction protein res subunit
Tax=CG_Hydro_01
Displaying items 1-30 of 34 in total

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