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Ig9238_scaffold_16795

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Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_16795_trna_3
unknown

Not on your lists

comp(53..125)
DNA (73bp)
transferRNA Glu
Ig9238_scaffold_16795_trna_2
unknown

Not on your lists

comp(180..252)
DNA (73bp)
transferRNA Ala
Ig9238_scaffold_16795_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(302..1684)
DNA (1383bp) protein (461aa)
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rule:MF_00022};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Glutamate--tRNA ligase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=SYE_NITMU
gltX; glutamyl-tRNA synthetase
Ig9238_scaffold_16795_trna_1
unknown

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1778..1849
DNA (72bp)
transferRNA Val
Ig9238_scaffold_16795_2
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2023..2331
DNA (309bp) protein (103aa)
Cytochrome c, class I Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R28_RHOFD
class I cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABD71775.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_16795_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2397..2681)
DNA (285bp) protein (95aa)
Cytochrome c, class I Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I83_DECAR
cytochrome c, class I
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_16795_4
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2803..3585)
DNA (783bp) protein (261aa)
hypothetical protein bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
elongation factor-1 alpha
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig9238_scaffold_16795_5
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3653..4879)
DNA (1227bp) protein (409aa)
Candidate Cytochrome c-type protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWU4_RAMTT
cytochrome c class I
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig9238_scaffold_16795_6
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5267..6265
DNA (999bp) protein (333aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI00038011D5
cytochrome c class I
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig9238_scaffold_16795_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6262..7110
DNA (849bp) protein (283aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RYM6_FERPA
4Fe-4S ferredoxin iron-sulfur binding domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Ig9238_scaffold_16795_8
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7110..8303
DNA (1194bp) protein (398aa)
Polysulphide reductase NrfD Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3I4_FERPA
polysulfide reductase NrfD
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_16795_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8613..9752
DNA (1140bp) protein (380aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI00035F54B6
cytochrome c
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_16795_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9787..10656)
DNA (870bp) protein (290aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Ig9238_scaffold_16795_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10656..11963)
DNA (1308bp) protein (436aa)
cytochrome b subunit of formate dehydrogenase-like protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
cytochrome b subunit of formate dehydrogenase-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Ig9238_scaffold_16795_12
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12124..13506
DNA (1383bp) protein (461aa)
Beta-lactamase domain protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5N9_LEPCP
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACB34751.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Ig9238_scaffold_16795_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13589..15070
DNA (1482bp) protein (494aa)
sensor histidine kinase Tax=Burkholderia oklahomensis RepID=UPI00016A86C3
response regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_16795_14
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15067..15720
DNA (654bp) protein (218aa)
Two-component response regulator Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VWW8_9BURK
Two-component response regulator {ECO:0000313|EMBL:EGF32899.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
response regulator
Ig9238_scaffold_16795_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15763..16146
DNA (384bp) protein (128aa)
Response regulator receiver protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMN1_ACCPU
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_16795_16
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16178..16984
DNA (807bp) protein (269aa)
Transcriptional regulator, Crp/Fnr family Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VWW7_9BURK
Transcriptional regulator {ECO:0000313|EMBL:KIF83492.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
cyclic nucleotide-binding domain protein
Ig9238_scaffold_16795_17
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17080..18072
DNA (993bp) protein (331aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002F95FE7
zinc-binding alcohol dehydrogenase family protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Ig9238_scaffold_16795_18
unknown

Not on your lists

comp(18059..18631)
DNA (573bp) protein (191aa)

This feature has no annotations

Ig9238_scaffold_16795_19
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18692..19405
DNA (714bp) protein (238aa)
Carbon monoxide dehydrogenase D protein Tax=Thalassobacter arenae DSM 19593 RepID=S9QCS1_9RHOB
ATPase {ECO:0000313|EMBL:KEJ97926.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;"
ATPase
Ig9238_scaffold_16795_20
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19453..20034)
DNA (582bp) protein (194aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K6I9_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ28516.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
Ig9238_scaffold_16795_21
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20052..20906)
DNA (855bp) protein (285aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003679987
hypothetical protein
Tax=RBG_16_Gallionellales_56_9_curated
Ig9238_scaffold_16795_22
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21324..21746
DNA (423bp) protein (141aa)
Rubrerythrin Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y869_LEPCP
rubrerythrin
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_16795_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21827..23167
DNA (1341bp) protein (447aa)
Putative ferredoxin Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y0_NITMU
putative ferredoxin
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_16795_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23252..23836
DNA (585bp) protein (195aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI000370705D
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_16795_25
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23858..24769)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X7M6_METSD
LysR family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_56_24_curated
Ig9238_scaffold_16795_26
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24884..25633
DNA (750bp) protein (250aa)
Glutaredoxin-family domain protein Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VN78_POLNA
glutaredoxin family protein
Glutaredoxin-family domain protein {ECO:0000313|EMBL:ABM37106.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Ig9238_scaffold_16795_27
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25742..27040
DNA (1299bp) protein (433aa)
Putative pyridine nucleotide-disulfide oxidoreductase Tax=Bordetella bronchiseptica RepID=Q7WI46_BORBR
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KCB40587.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
pyridine nucleotide-disulfide oxidoreductase
Displaying items 1-30 of 97 in total

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