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Ig9238_scaffold_17656

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_17656_1
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87..1274)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFF5_THIDA
hypothetical protein
Tax=GWA2_Gallionellales_60_18_curated
Ig9238_scaffold_17656_2
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1381..2121
DNA (741bp) protein (247aa)
Pteridine reductase Tax=Azoarcus sp. KH32C RepID=H0PWW7_9RHOO
pteridine reductase
Pteridine reductase {ECO:0000313|EMBL:BAO28007.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig9238_scaffold_17656_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2126..2962
DNA (837bp) protein (279aa)
tRNA 2-thiocytidine biosynthesis protein TtcA bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
PP-loop domain-containing protein
Ig9238_scaffold_17656_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2959..4212
DNA (1254bp) protein (418aa)
Serine:pyruvate/alanine:glyoxylate aminotransferase Tax=mine drainage metagenome RepID=T1AAE5_9ZZZZ
serine-pyruvate transaminase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_17656_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4277..5155)
DNA (879bp) protein (293aa)
Peptidase M48 Ste24p Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTW2_SIDLE
peptidase M48 Ste24p
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_17656_6
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5152..5676)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FZF3_SHESH
hypothetical protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
Ig9238_scaffold_17656_7
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5722..6936)
DNA (1215bp) protein (405aa)
Mg2+/Co2+ transporter Tax=Hylemonella gracilis ATCC 19624 RepID=F3KR03_9BURK
magnesium transporter
Tax=RBG_16_Betaproteobacteria_56_24_curated
Ig9238_scaffold_17656_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6986..7858)
DNA (873bp) protein (291aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NZF6_CHRVO
Tax=CG_Rhodocyc_01
Ig9238_scaffold_17656_9
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7875..9290)
DNA (1416bp) protein (472aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Adenosylhomocysteinase Tax=Methyloversatilis universalis FAM5 RepID=F5RFA1_9RHOO
s-adenosyl-L-homocysteine hydrolase
Ig9238_scaffold_17656_10
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9523..10671)
DNA (1149bp) protein (383aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
S-adenosylmethionine synthase Tax=Ralstonia solanacearum RepID=METK_RALSO
Ig9238_scaffold_17656_11
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10753..11637
DNA (885bp) protein (295aa)
Lipid A biosynthesis acyltransferase Tax=Pseudogulbenkiania RepID=G2IXB6_PSEUL
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:EEG09476.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
Ig9238_scaffold_17656_12
unknown

Not on your lists

comp(11586..11840)
DNA (255bp) protein (85aa)

This feature has no annotations

Ig9238_scaffold_17656_13
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11920..12438
DNA (519bp) protein (173aa)
Lipid A biosynthesis acyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6B0A2_9PROT
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:BAN34157.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Ig9238_scaffold_17656_14
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12451..13398)
DNA (948bp) protein (316aa)
rfbB; dTDP-D-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-D-glucose 4,6-dehydratase, putative {ECO:0000313|EMBL:ACJ01369.1}; EC=4.2.1.46 {ECO:0000313|EMBL:ACJ01369.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
NAD-dependent dehydratase Tax=Burkholderia sp. WSM4176 RepID=UPI00036D1281
Ig9238_scaffold_17656_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13395..14621)
DNA (1227bp) protein (409aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000373AC70
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
Ig9238_scaffold_17656_16
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(14618..17152)
DNA (2535bp) protein (845aa)
Tetratricopeptide TPR_2 repeat protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZP6_OPITP
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACB77232.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Ig9238_scaffold_17656_17
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17263..18141
DNA (879bp) protein (293aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Diaminopimelate epimerase Tax=Dechloromonas aromatica (strain RCB) RepID=DAPF_DECAR
diaminopimelate epimerase
Ig9238_scaffold_17656_18
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18135..18812
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AEG0_9PROT
3'-5'-bisphosphate nucleotidase {ECO:0000313|EMBL:GAO37215.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
Ig9238_scaffold_17656_19
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18796..19686
DNA (891bp) protein (297aa)
Tyrosine recombinase XerC Tax=Sulfuricella denitrificans skB26 RepID=S6B0B0_9PROT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
tyrosine recombinase XerC
Ig9238_scaffold_17656_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19738..20178
DNA (441bp) protein (147aa)
Zinc uptake regulation protein ZUR Tax=Nitrosospira sp. APG3 RepID=M5DK40_9PROT
ferric uptake regulator family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_17656_21
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20211..21230
DNA (1020bp) protein (340aa)
Cobalamin synthesis protein/P47K family protein Tax=Magnetospirillum gryphiswaldense RepID=A4TZE7_9PROT
Cobalamin synthesis protein/P47K family protein {ECO:0000313|EMBL:CAM76004.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Cobalamin synthesis protein/P47K
Ig9238_scaffold_17656_22
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21234..22232
DNA (999bp) protein (333aa)
Cobalamin synthesis protein P47K Tax=Delftia sp. (strain Cs1-4) RepID=F6AP87_DELSC
cobalamin synthesis protein P47K
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_17656_23
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22250..22876
DNA (627bp) protein (209aa)
Lipoprotein-releasing system ATP-binding protein LolD Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVE9_RHOCS
lolD; lipoprotein-releasing system ATP-binding protein LolD
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_17656_24
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22873..24045
DNA (1173bp) protein (391aa)
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5N0_9GAMM
ABC transporter permease
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_17656_25
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24057..24557
DNA (501bp) protein (167aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003644CA6
putative uncharacterized protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
Ig9238_scaffold_17656_26
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24572..25672
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00037CEC6D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL26573.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Ig9238_scaffold_17656_27
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25680..26219
DNA (540bp) protein (180aa)
ATP-dependent protease subunit HslV {ECO:0000255|HAMAP-Rule:MF_00248}; EC=3.4.25.2 {ECO:0000255|HAMAP-Rule:MF_00248};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
ATP-dependent protease subunit HslV Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=HSLV_LEPCP
ATP-dependent protease peptidase subunit
Ig9238_scaffold_17656_28
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26239..27588
DNA (1350bp) protein (450aa)
ATP-dependent protease Tax=Thiobacillus thioparus RepID=UPI000374AC9E
hslU; ATP-dependent protease ATP-binding subunit HslU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Ig9238_scaffold_17656_29
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28133..29041
DNA (909bp) protein (303aa)
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RBG_16_Betaproteobacteria_58_11_curated
Ig9238_scaffold_17656_30
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29065..30222)
DNA (1158bp) protein (386aa)
Cardiolipin synthase B {ECO:0000256|HAMAP-Rule:MF_01917}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01917};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01917};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
Phospholipase D/transphosphatidylase Tax=Sulfuricella denitrificans skB26 RepID=S6AIZ0_9PROT
phospholipase D/transphosphatidylase
Displaying items 1-30 of 73 in total

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