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Ig9238_scaffold_18110

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_18110_1
unknown

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1..180
DNA (180bp) protein (60aa)

This feature has no annotations

Ig9238_scaffold_18110_2
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237..998
DNA (762bp) protein (254aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000361613B
hypothetical protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
Ig9238_scaffold_18110_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1051..1521
DNA (471bp) protein (157aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI0003679E24
hypothetical protein
Tax=CG_Rhodof_04
Ig9238_scaffold_18110_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1858..2613
DNA (756bp) protein (252aa)
Uncharacterized protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GLD1_NITSI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_18110_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2780..3172)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Hoeflea phototrophica DFL-43 RepID=A9D9K3_9RHIZ
Conserved exported protein of unknown function
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_18110_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3176..3526)
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Polaromonas sp. CF318 RepID=J2UFH2_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Ig9238_scaffold_18110_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3589..4581)
DNA (993bp) protein (331aa)
Patatin Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIH6_9GAMM
putative esterase of the alpha-beta hydrolase superfamily
Tax=CG_Rhodof_02
Ig9238_scaffold_18110_8
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4855..7131)
DNA (2277bp) protein (759aa)
Selenide, water dikinase {ECO:0000313|EMBL:KFB69474.1}; EC=2.7.9.3 {ECO:0000313|EMBL:KFB69474.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
Pyridine nucleotide-disulfide oxidoreductase family protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTT2_ACCPU
pyridine nucleotide-disulfide oxidoreductase family protein
Ig9238_scaffold_18110_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7646..8203
DNA (558bp) protein (186aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI0003748F3E
RNA polymerase sigma factor
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Ig9238_scaffold_18110_10
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8733..8969
DNA (237bp) protein (79aa)
Putative uncharacterized protein Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHD6_GALCS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig9238_scaffold_18110_11
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9147..10145)
DNA (999bp) protein (333aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI00036D9CC9
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
Ig9238_scaffold_18110_12
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10235..11209)
DNA (975bp) protein (325aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6A9W9_9PROT
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJP49428.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Ig9238_scaffold_18110_13
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11307..12800
DNA (1494bp) protein (498aa)
Putative hydrolase of the metallo-beta-lactamase superfamily Tax=Thiorhodovibrio sp. 970 RepID=H8YVH8_9GAMM
Putative hydrolase of the metallo-beta-lactamase superfamily {ECO:0000313|EMBL:EIC23918.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
Ig9238_scaffold_18110_14
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13193..16111
DNA (2919bp) protein (973aa)
endoproteinase ArgC Tax=Xanthomonas sacchari RepID=UPI000262B0F5
Endoproteinase ArgC {ECO:0000313|EMBL:EYR65995.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
endoproteinase ArgC
Ig9238_scaffold_18110_15
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16273..17262)
DNA (990bp) protein (330aa)
Putative hydrolase transmembrane protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222P8_RHOFD
putative hydrolase transmembrane protein
Putative hydrolase transmembrane protein {ECO:0000313|EMBL:ABD68005.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_18110_16
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17252..18553)
DNA (1302bp) protein (434aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222P9_RHOFD
Fis family two component sigma-54 specific transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABD68004.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_18110_17
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18567..20030)
DNA (1464bp) protein (488aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Histidine kinase Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222Q0_RHOFD
histidine kinase
Ig9238_scaffold_18110_18
unknown

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comp(20128..20343)
DNA (216bp) protein (72aa)

This feature has no annotations

Ig9238_scaffold_18110_19
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20346..21143)
DNA (798bp) protein (266aa)
Heme exporter protein CcmC Tax=Janthinobacterium sp. HH01 RepID=L9PNH4_9BURK
heme exporter protein CcmC
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Ig9238_scaffold_18110_20
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21293..21934)
DNA (642bp) protein (214aa)
Uncharacterized protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222N6_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD68017.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_18110_21
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21969..23672)
DNA (1704bp) protein (568aa)
Uncharacterized protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222N7_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO29274.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig9238_scaffold_18110_22
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23669..24688)
DNA (1020bp) protein (340aa)
NHL repeat protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222N8_RHOFD
NHL repeat-containing protein
NHL repeat protein {ECO:0000313|EMBL:ABD68015.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_18110_23
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24691..26805)
DNA (2115bp) protein (705aa)
Uncharacterized protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222N9_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD68014.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_18110_24
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26830..27969)
DNA (1140bp) protein (380aa)
NHL repeat protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222P0_RHOFD
NHL repeat-containing protein
NHL repeat protein {ECO:0000313|EMBL:ABD68013.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_18110_25
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28212..28805)
DNA (594bp) protein (198aa)
Cytochrome c family protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222P1_RHOFD
cytochrome c family protein
Cytochrome c family protein {ECO:0000313|EMBL:ABD68012.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_18110_26
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29103..29942)
DNA (840bp) protein (280aa)
Tetratricopeptide TPR_2 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222P2_RHOFD
hypothetical protein
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:ABD68011.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_18110_27
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29929..30978)
DNA (1050bp) protein (350aa)
Uncharacterized protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222P3_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD68010.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_18110_28
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31055..31759)
DNA (705bp) protein (235aa)
Cytochrome c family protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222P4_RHOFD
cytochrome c family protein
Cytochrome c family protein {ECO:0000313|EMBL:ABD68009.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_18110_29
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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comp(32048..32641)
DNA (594bp) protein (198aa)
Tax=GWC2_Nitrospirae_57_9_curated
Ig9238_scaffold_18110_30
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

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comp(32638..33552)
DNA (915bp) protein (305aa)
Bbox zinc finger domain containing protein Tax=Acanthamoeba castellanii str. Neff RepID=L8HK38_ACACA
Bbox zinc finger domain containing protein {ECO:0000313|EMBL:ELR25038.1}; species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
NHL repeat containing protein
Displaying items 1-30 of 33 in total

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