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Ig9238_scaffold_18172

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_18172_1
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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1..420
DNA (420bp) protein (140aa)
transcriptional regulator Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000366DCAA
Transcriptional regulator {ECO:0000313|EMBL:KJS07281.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
norR; anaerobic nitric oxide reductase transcriptional regulator
Ig9238_scaffold_18172_2
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(474..752)
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Burkholderia graminis C4D1M RepID=B1FZU9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDT10459.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
hypothetical protein
Ig9238_scaffold_18172_3
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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851..1792
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family Tax=Collimonas fungivorans (strain Ter331) RepID=G0A8X6_COLFT
cmpR; LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEK61839.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Ig9238_scaffold_18172_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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1789..2715
DNA (927bp) protein (309aa)
Cation diffusion facilitator family transporter Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9PAT1_CYAGP
cation diffusion facilitator family transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_18172_5
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2712..3662
DNA (951bp) protein (317aa)
Aminoglycoside phosphotransferase Tax=alpha proteobacterium BAL199 RepID=A8U2W0_9PROT
phosphotransferase enzyme family protein
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:AIO35091.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
Ig9238_scaffold_18172_6
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3659..4936
DNA (1278bp) protein (426aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
Enolase Tax=Rhizobium sp. CF122 RepID=J3BM75_9RHIZ
Ig9238_scaffold_18172_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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5129..6931
DNA (1803bp) protein (601aa)
Type II secretion system protein E:General secretory system II, protein E, N-terminal Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GX4_DECAR
type II secretion system protein E
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Ig9238_scaffold_18172_8
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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7122..8660
DNA (1539bp) protein (513aa)
Putative AP superfamily protein Tax=Polaromonas sp. CF318 RepID=J2KZJ8_9BURK
type I phosphodiesterase / nucleotide pyrophosphatase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_18172_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8728..9288)
DNA (561bp) protein (187aa)
hypothetical protein bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96700.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig9238_scaffold_18172_10
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9341..10312
DNA (972bp) protein (324aa)
Uncharacterized protein Tax=Ralstonia sp. PBA RepID=I9BQU5_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ02146.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
40-residue YVTN family beta-propeller repeat protein
Ig9238_scaffold_18172_11
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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10309..11052
DNA (744bp) protein (248aa)
Putative polysaccharide deacetylase PdaA {ECO:0000313|EMBL:KFB68545.1}; EC=3.-.-.- {ECO:0000313|EMBL:KFB68545.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
Polysaccharide deacetylase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKP1_ACCPU
polysaccharide deacetylase
Ig9238_scaffold_18172_12
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11240..12097
DNA (858bp) protein (286aa)
Uncharacterized protein Tax=Ralstonia solanacearum CFBP2957 RepID=D8NJZ5_RALSL
Fatty acid hydroxylase superfamily protein {ECO:0000313|EMBL:EWS54599.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
conserved membrane protein of unknown function
Ig9238_scaffold_18172_13
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12094..14505
DNA (2412bp) protein (804aa)
endoproteinase ArgC Tax=Xanthomonas sacchari RepID=UPI000262B0F5
Uncharacterized protein {ECO:0000313|EMBL:KFN50809.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
endoproteinase ArgC
Ig9238_scaffold_18172_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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14498..15853
DNA (1356bp) protein (452aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
Ig9238_scaffold_18172_15
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15892..16296)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Burkholderia terrae BS001 RepID=I5CNQ6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDP87453.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein
Ig9238_scaffold_18172_16
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16319..16657
DNA (339bp) protein (113aa)
Transposase, IS204/IS1001/IS1096/IS1165 family protein Tax=Burkholderia terrae BS001 RepID=I5CNQ5_9BURK
Transposase, IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:EIM97523.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
transposase, IS204/IS1001/IS1096/IS1165 family protein
Ig9238_scaffold_18172_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17066..19435)
DNA (2370bp) protein (790aa)
Uncharacterized protein bin=GWF2_Bacteroidetes_41_31 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
protein of unknown function DUF214
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig9238_scaffold_18172_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19432..20244)
DNA (813bp) protein (271aa)
Cyclic nucleotide-binding protein bin=GWF1_Spirochaetes_60_12 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
cyclic nucleotide-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig9238_scaffold_18172_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20317..20751)
DNA (435bp) protein (145aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_41_31 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig9238_scaffold_18172_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20948..21547
DNA (600bp) protein (200aa)
Transcriptional regulator Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPG2_9BURK
Transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig9238_scaffold_18172_21
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(22187..22882)
DNA (696bp) protein (232aa)
Integral membrane protein Tax=Burkholderia sp. SJ98 RepID=K8R406_9BURK
yccA; hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Displaying 21 items

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