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Ig9238_scaffold_111231

Search features with annotation key words

Displaying items 1-30 of 285 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_111231_1
unknown

Not on your lists

comp(3..173)
DNA (171bp) protein (57aa)

This feature has no annotations

Ig9238_scaffold_111231_2
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1988..3757)
DNA (1770bp) protein (590aa)
Uncharacterized protein Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0G4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV94313.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein
Ig9238_scaffold_111231_3
unknown

Not on your lists

4716..4961
DNA (246bp) protein (82aa)

This feature has no annotations

Ig9238_scaffold_111231_4
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5640..5828
DNA (189bp) protein (63aa)
hypothetical protein Tax=Acinetobacter baumannii RepID=UPI0002BC3B84
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC36086.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 /; CIP 106301).;"
Ig9238_scaffold_111231_5
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5833..6243
DNA (411bp) protein (137aa)
hypothetical protein Tax=Methylomicrobium buryatense RepID=UPI0003488973
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Ig9238_scaffold_111231_6
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6315..6590
DNA (276bp) protein (92aa)
Putative transcription regulator protein Tax=Ralstonia solanacearum CMR15 RepID=D8N3W5_RALSL
hypothetical protein
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24329.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
Ig9238_scaffold_111231_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6862..8325
DNA (1464bp) protein (488aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45614.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Putative uncharacterized protein bin=GWE2_Gallionellales_58_10 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
putative uncharacterized protein
Ig9238_scaffold_111231_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8372..8740)
DNA (369bp) protein (123aa)
twitching motility protein PilT Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AF4A
PilT protein domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_111231_9

Not on your lists

comp(8737..8982)
DNA (246bp) protein (82aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034539C6
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:EQD26625.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Ig9238_scaffold_111231_10
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9184..11208
DNA (2025bp) protein (675aa)
TonB-dependent receptor Tax=Glaciecola arctica BSs20135 RepID=K6XD57_9ALTE
TonB-dependent receptor
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_111231_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

11439..12602
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PB22_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40431.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Ig9238_scaffold_111231_12
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13071..13736)
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=Thauera sp. 27 RepID=N6Y1S4_9RHOO
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_111231_13
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13741..14094)
DNA (354bp) protein (118aa)
Putative lipoprotein Tax=Pseudomonas syringae pv. maculicola str. ES4326 RepID=F3HSU1_PSEYM
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_111231_14
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14121..14786)
DNA (666bp) protein (222aa)
Curli production assembly/transport component CsgG Tax=Serratia RepID=G0BEI9_SERSA
membrane protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_111231_15
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15173..16993
DNA (1821bp) protein (607aa)
hypothetical protein Tax=Kangiella aquimarina RepID=UPI0003648799
Uncharacterized protein {ECO:0000313|EMBL:KFN42690.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypothetical protein
Ig9238_scaffold_111231_16
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17009..17647
DNA (639bp) protein (213aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI000348D907
plsY; glycerol-3-phosphate acyltransferase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_111231_17
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17649..18461
DNA (813bp) protein (271aa)
BirA bifunctional protein bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas translucens genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
biotin--protein ligase
Tax=GWF1_Xanthomonadales_69_6_curated
Ig9238_scaffold_111231_18
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18458..19204
DNA (747bp) protein (249aa)
Type III pantothenate kinase bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
transcriptional regulator
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_111231_19
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19332..19985
DNA (654bp) protein (218aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN51986.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Sporulation domain-containing protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
sporulation related protein
Ig9238_scaffold_111231_trna_1
unknown

Not on your lists

20017..20089
DNA (73bp)
transferRNA Thr
Ig9238_scaffold_111231_20
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20119..20526
DNA (408bp) protein (136aa)
sulfurtransferase Tax=Arenimonas oryziterrae RepID=UPI0003B42793
rhodanese-related sulfurtransferase
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_111231_21
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20526..21446
DNA (921bp) protein (307aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
arginase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
arginase
Ig9238_scaffold_111231_22
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21471..21938)
DNA (468bp) protein (156aa)
Lipid A 3-O-deacylase (PagL) Tax=Rhodanobacter spathiphylli B39 RepID=I4VY42_9GAMM
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_111231_23
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22083..23018)
DNA (936bp) protein (312aa)
hypothetical protein Tax=Thioalkalivibrio RepID=UPI00036C48CF
Transcriptional regulator, AraC family
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_111231_24
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23230..26169
DNA (2940bp) protein (980aa)
formate dehydrogenase Tax=Arenimonas oryziterrae RepID=UPI0003B33440
molybdopterin oxidoreductase Fe4S4 region
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_111231_25
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26222..27988
DNA (1767bp) protein (589aa)
Sodium (Na+) symporter bin=GWF1_Xanthomonadales_69_6 species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
sodium (Na+) symporter
Tax=GWF1_Xanthomonadales_69_6_curated
Ig9238_scaffold_111231_26
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27985..28731
DNA (747bp) protein (249aa)
(Fe-S)-binding protein Tax=Arenimonas oryziterrae RepID=UPI0003B6271D
Uncharacterized protein {ECO:0000313|EMBL:KFL37536.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
4Fe-4S ferredoxin, iron-sulfur binding domain protein
Ig9238_scaffold_111231_27
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28828..29754
DNA (927bp) protein (309aa)
DMSO reductase anchor subunit (DmsC) bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
DMSO reductase anchor subunit (DmsC)
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_111231_28
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29807..30721)
DNA (915bp) protein (305aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Porphobilinogen deaminase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hemC; porphobilinogen deaminase
Ig9238_scaffold_111231_29
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30773..31483)
DNA (711bp) protein (237aa)
transcriptional regulator Tax=Arenimonas oryziterrae RepID=UPI0003B5D8FD
Chemotaxis protein CheY {ECO:0000313|EMBL:KGM54374.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
putative two-component system response regulator
Displaying items 1-30 of 285 in total

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