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Ig9238_scaffold_35478

Search features with annotation key words

Displaying items 1-30 of 261 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_35478_1
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)
WD40 repeat-containing protein Tax=Thiorhodovibrio sp. 970 RepID=H8Z2B6_9GAMM
TIR-like domain-containing protein (DUF1863)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_35478_2
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

343..1791
DNA (1449bp) protein (483aa)
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase Tax=Arenimonas oryziterrae RepID=UPI0003B3799E
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_35478_3
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1966..3054
DNA (1089bp) protein (363aa)
Outer membrane protein Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URH7_PSEUP
Uncharacterized protein {ECO:0000313|EMBL:KFN45411.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
outer membrane protein
Ig9238_scaffold_35478_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3301..3714
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:AKC85974.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
rare lipoprotein A
Ig9238_scaffold_35478_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4055..5083
DNA (1029bp) protein (343aa)
Lipid A biosynthesis acyltransferase Tax=Acidovorax sp. (strain JS42) RepID=A1WAB1_ACISJ
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:ABM43186.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Ig9238_scaffold_35478_6
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4939..6036)
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI0003621794
YjgP/YjgQ family permease {ECO:0000313|EMBL:EKM98748.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
YjgP/YjgQ family permease
Ig9238_scaffold_35478_7
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6033..7100)
DNA (1068bp) protein (356aa)
Permease YjgP/YjgQ Tax=Nitrococcus mobilis Nb-231 RepID=A4BMW9_9GAMM
Permease YjgP/YjgQ {ECO:0000313|EMBL:EAR22568.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
permease YjgP/YjgQ
Ig9238_scaffold_35478_8
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7200..8396)
DNA (1197bp) protein (399aa)
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate CoA ligase Tax=Arenimonas oryziterrae RepID=UPI0003B407D7
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_35478_9
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8538..9578)
DNA (1041bp) protein (347aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_35478_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9741..11888
DNA (2148bp) protein (716aa)
dipeptidyl-peptidase 7 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000304884D
Dipeptidyl-peptidase 7 {ECO:0000313|EMBL:AKC85960.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
peptidase S46
Ig9238_scaffold_35478_11
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12018..13313
DNA (1296bp) protein (432aa)
folylpolyglutamate synthase Tax=Xanthomonas sp. M97 RepID=UPI0003A5AF3C
FolC bifunctional protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_35478_12
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13347..14261
DNA (915bp) protein (305aa)
Uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter spathiphylli genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_35478_13
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14261..14791
DNA (531bp) protein (177aa)
Uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
colicin V production protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_35478_14
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14796..16268
DNA (1473bp) protein (491aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
amidophosphoribosyltransferase Tax=Arenimonas oryziterrae RepID=UPI0003B6D6E9
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_35478_15
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16419..18845)
DNA (2427bp) protein (809aa)
penicillin acylase 2 (EC:3.5.1.11)
hypothetical protein Tax=Arenimonas oryziterrae RepID=UPI0003B3325F
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_35478_16
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18906..19670)
DNA (765bp) protein (255aa)
Alanine racemase domain protein Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CDA7_ALCDB
Uncharacterized protein {ECO:0000313|EMBL:KGM57634.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
alanine racemase domain-containing protein
Ig9238_scaffold_35478_17
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19971..21722
DNA (1752bp) protein (584aa)
asparagine synthase, glutamine-hydrolyzing (EC:6.3.5.4)
asparagine synthetase B Tax=Arenimonas oryziterrae RepID=UPI0003B2F01B
Asparagine synthetase B {ECO:0000313|EMBL:KFN44796.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Ig9238_scaffold_35478_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22139..23866
DNA (1728bp) protein (576aa)
hydroxylamine oxidase (EC:1.7.3.4)
Hydroxylamine oxidoreductase Tax=Nitrosomonas cryotolerans ATCC 49181 RepID=M5DDF6_9PROT
Tax=CG_Rhodocyc_01
Ig9238_scaffold_35478_19
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23867..24886
DNA (1020bp) protein (340aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBV2_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ27713.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
Ig9238_scaffold_35478_20
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25003..25716
DNA (714bp) protein (238aa)
Cytochrome c-554 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA34_NITMU
cytochrome c-554
Tax=CG_Rhodocyc_01
Ig9238_scaffold_35478_21
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25718..26290
DNA (573bp) protein (191aa)
NapC/NirT cytochrome c domain protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ47_NITHN
NapC/NirT cytochrome C domain-containing protein
NapC/NirT cytochrome c domain protein {ECO:0000313|EMBL:ADE14260.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Ig9238_scaffold_35478_22
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26427..28058
DNA (1632bp) protein (544aa)
Regulatory protein GntR HTH Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ43_NITHN
GntR family transcriptional regulator
Tax=CG_Rhodocyc_01
Ig9238_scaffold_35478_23
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27998..28453)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0003809588
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_35478_24
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28569..29300)
DNA (732bp) protein (244aa)
Thiopurine S-methyltransferase Tax=Rhodanobacter denitrificans RepID=M4NDR6_9GAMM
thiopurine S-methyltransferase, Se/Te detoxification family
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_35478_25

Not on your lists

comp(29245..29559)
DNA (315bp) protein (105aa)
Addiction module antidote protein, HigA Tax=mine drainage metagenome RepID=T1BQU4_9ZZZZ
Addiction module antidote protein, HigA {ECO:0000313|EMBL:EQD75221.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA-binding protein
Ig9238_scaffold_35478_26

Not on your lists

comp(29570..29848)
DNA (279bp) protein (93aa)
Plasmid maintenance system killer Tax=mine drainage metagenome RepID=T1CYK3_9ZZZZ
Plasmid maintenance system killer {ECO:0000313|EMBL:EQD75220.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
plasmid maintenance system killer protein
Ig9238_scaffold_35478_27
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30068..32314)
DNA (2247bp) protein (749aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
DNA topoisomerase IV subunit A (EC:5.99.1.-)
DNA topoisomerase IV subunit A Tax=Arenimonas oryziterrae RepID=UPI0003B74185
Ig9238_scaffold_35478_28
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32584..33831
DNA (1248bp) protein (416aa)
Drug resistance transporter, Bcr/CflA subfamily bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Bcr/CflA subfamily drug resistance transporter
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_35478_29
unknown

Not on your lists

comp(33880..34299)
DNA (420bp) protein (140aa)

This feature has no annotations

Ig9238_scaffold_35478_30
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34684..35805
DNA (1122bp) protein (374aa)
Squalene/phytoene synthase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0D6_NITHN
Uncharacterized protein {ECO:0000313|EMBL:EWG99726.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
Squalene/phytoene synthase
Displaying items 1-30 of 261 in total

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