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Ig9238_scaffold_45501

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_45501_1
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1150
DNA (1149bp) protein (383aa)
Uncharacterized protein Tax=Glaciecola lipolytica E3 RepID=K6XRT1_9ALTE
putative transcriptional regulator
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_45501_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1192..1581
DNA (390bp) protein (130aa)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_45501_3
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1780..3543
DNA (1764bp) protein (588aa)
Uncharacterized protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUE5_9GAMM
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_45501_4
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3540..5354
DNA (1815bp) protein (605aa)
Putative uncharacterized protein Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXT4_9GAMM
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_45501_5
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5391..6728)
DNA (1338bp) protein (446aa)
amino acid transporter Tax=Xanthomonas sp. M97 RepID=UPI0003A24078
amino acid transporter
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_45501_6
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6962..7849)
DNA (888bp) protein (296aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036C2F5E
Vitamin K epoxide reductase
Vitamin K epoxide reductase {ECO:0000313|EMBL:AHE98363.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
Ig9238_scaffold_45501_7
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7999..8748
DNA (750bp) protein (250aa)
Putative uncharacterized protein Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TQE8_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM33186.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Ig9238_scaffold_45501_8
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8753..9571
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QYG9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EPX84617.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
hypothetical protein
Ig9238_scaffold_45501_9
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9568..10452
DNA (885bp) protein (295aa)
Methyltransferase FkbM family Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZJ48_METPB
FkbM family methyltransferase
Methyltransferase FkbM family {ECO:0000313|EMBL:ACB78622.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Ig9238_scaffold_45501_10
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10474..11286)
DNA (813bp) protein (271aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B70BDB
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:EDY83826.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
hypothetical protein
Ig9238_scaffold_45501_11
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11620..12057)
DNA (438bp) protein (146aa)
Universal stress protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q607I6_METCA
universal stress protein
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Ig9238_scaffold_45501_12
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12054..13136)
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036A0FFF
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Ig9238_scaffold_45501_13
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13111..14532)
DNA (1422bp) protein (474aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00035D2A44
Uncharacterized protein {ECO:0000313|EMBL:KGJ90491.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp. ND16A.;"
membrane protein involved in D-alanine export DltB-like protein
Ig9238_scaffold_45501_14

Not on your lists

comp(14811..15650)
DNA (840bp) protein (280aa)
Tetratricopeptide repeat domain protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPL6_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49069.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Ig9238_scaffold_45501_15
unknown

Not on your lists

15867..16043
DNA (177bp) protein (59aa)

This feature has no annotations

Ig9238_scaffold_45501_16
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16476..18497
DNA (2022bp) protein (674aa)
fadH; 2,4-dienoyl-CoA reductase [NADPH] (EC:1.3.1.34)
NADH:flavin oxidoreductase/NADH oxidase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
Ig9238_scaffold_45501_17
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18723..20579)
DNA (1857bp) protein (619aa)
DNA mismatch repair protein MutL Tax=Arenimonas oryziterrae RepID=UPI0003B5EC49
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
DNA mismatch repair protein MutL
Ig9238_scaffold_45501_18
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20797..22182)
DNA (1386bp) protein (462aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase bin=GWF1_Xanthomonadales_69_6 species=Ectothiorhodospira sp. PHS-1 genus=Ectothiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_45501_19
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22268..22771)
DNA (504bp) protein (168aa)
ATP-binding protein Tax=Arenimonas oryziterrae RepID=UPI0003B59B73
Uncharacterized protein {ECO:0000313|EMBL:KFN41163.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
Ig9238_scaffold_45501_20
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22768..24255)
DNA (1488bp) protein (496aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN52093.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Carbohydrate kinase, YjeF related protein bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
carbohydrate kinase
Ig9238_scaffold_45501_21
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24612..25676
DNA (1065bp) protein (355aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
iron-sulfur cluster-binding protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
iron-sulfur cluster binding protein
Ig9238_scaffold_45501_22
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25767..27287)
DNA (1521bp) protein (507aa)
pgi; glucose-6-phosphate isomerase (gpi) protein (EC:5.3.1.9)
Glucose-6-phosphate isomerase bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_45501_23
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27536..28381)
DNA (846bp) protein (282aa)
pantoate--beta-alanine ligase Tax=Arenimonas oryziterrae RepID=UPI0003B33EE8
pantoate--beta-alanine ligase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_45501_24
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28381..29205)
DNA (825bp) protein (275aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Arenimonas oryziterrae RepID=UPI0003B3F9ED
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_45501_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29238..29747)
DNA (510bp) protein (170aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Tax=Stenotrophomonas maltophilia D457 RepID=I0KMH2_STEMA
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KDE89099.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
Ig9238_scaffold_45501_26

Not on your lists

comp(29744..31111)
DNA (1368bp) protein (456aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; species="Bacteria; environmental samples.;" source="uncultured bacterium lac153.;"
poly(A) polymerase (EC:2.7.7.19)
polynucleotide adenylyltransferase Tax=Pseudomonas geniculata RepID=UPI00029AD00F
Ig9238_scaffold_45501_trna_1
unknown

Not on your lists

31285..31357
DNA (73bp)
transferRNA Glu
Ig9238_scaffold_45501_27
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31544..31867
DNA (324bp) protein (108aa)
ferredoxin Tax=Rudaea cellulosilytica RepID=UPI00036C7F8D
ferredoxin
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_45501_28
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31933..32475)
DNA (543bp) protein (181aa)
Putative secreted protein Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USE8_PSEUP
Putative secreted protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_45501_29
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32525..33424)
DNA (900bp) protein (300aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
dapA; dihydrodipicolinate synthase (dhdps) protein (EC:4.2.1.52)
dihydrodipicolinate synthase Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EC87D1
Displaying items 1-30 of 71 in total

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