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Ig9238_scaffold_20056

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_20056_1
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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206..808
DNA (603bp) protein (201aa)
DsbA-like thioredoxin domain-containing protein Tax=Pseudomonas sp. (strain M1) RepID=L1I0Y0_PSEUO
DsbA-like thioredoxin domain protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_20056_2
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

805..1608
DNA (804bp) protein (268aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Ig9238_scaffold_20056_3
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2012..2707)
DNA (696bp) protein (232aa)
Putative cyclic AMP receptor protein,catabolite gene activator bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cap; cAMP-regulatory protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_20056_4
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2907..3698
DNA (792bp) protein (264aa)
S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase Tax=Arenimonas oryziterrae RepID=UPI0003B463C0
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_20056_5
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4062..4709)
DNA (648bp) protein (216aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00010155}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00231964};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Tax=Xanthomonas campestris pv. campestris RepID=COQ7_XANC8
ubiquinone biosynthesis protein
Ig9238_scaffold_20056_6
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4706..5938)
DNA (1233bp) protein (411aa)
Uncharacterized protein Tax=Rhodanobacter fulvus Jip2 RepID=I4VRM6_9GAMM
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
Ig9238_scaffold_20056_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6046..6474
DNA (429bp) protein (143aa)
50S ribosomal protein L13 Tax=Xanthomonas campestris pv. translucens RepID=K8Z6H0_XANCT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
50S ribosomal protein L13
Ig9238_scaffold_20056_8
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6541..6933
DNA (393bp) protein (131aa)
30S ribosomal protein S9 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
rpsI; 30S ribosomal protein S9
Tax=GWF1_Xanthomonadales_69_6_curated
Ig9238_scaffold_20056_trna_1
unknown

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6964..7034
DNA (71bp)
transferRNA Gln
Ig9238_scaffold_20056_9
unknown

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comp(7023..7142)
DNA (120bp) protein (40aa)

This feature has no annotations

Ig9238_scaffold_20056_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7383..8363
DNA (981bp) protein (327aa)
fumarylacetoacetate hydrolase Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FE9E0C
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:AKC87209.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
fumarylacetoacetate hydrolase
Ig9238_scaffold_20056_11
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8413..9075
DNA (663bp) protein (221aa)
maleylacetoacetate isomerase Tax=Xanthomonas sp. SHU308 RepID=UPI00036CCE82
Maleylacetoacetate isomerase {ECO:0000313|EMBL:KGO98014.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
maleylacetoacetate isomerase
Ig9238_scaffold_20056_12
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9341..10447)
DNA (1107bp) protein (369aa)
Twitching motility protein PilT {ECO:0000313|EMBL:KFN50228.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Tfp pilus assembly protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
twitching motility protein
Ig9238_scaffold_20056_13
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10636..10974
DNA (339bp) protein (113aa)
Lipoprotein Tax=Pseudomonas aeruginosa RepID=U9L290_PSEAI
chromosome segregation ATPase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_20056_14
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10971..11903
DNA (933bp) protein (311aa)
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas albilineans genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
membrane protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_20056_15
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12389..12613
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN50224.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Ig9238_scaffold_20056_16
unknown

Not on your lists

13043..13210
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 17 items

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