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Ig9238_scaffold_108149

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_108149_1
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204..1943
DNA (1740bp) protein (580aa)
isocitrate dehydrogenase Tax=Arenimonas oryziterrae RepID=UPI0003B405A6
isocitrate dehydrogenase
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_108149_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2085..2972
DNA (888bp) protein (296aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI000374AB36
putative methyltransferase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_108149_3
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3200..3793
DNA (594bp) protein (198aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Pseudouridine synthase bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
pseudouridine synthase
Ig9238_scaffold_108149_4
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3955..4704
DNA (750bp) protein (250aa)
hypothetical protein Tax=Arenimonas oryziterrae RepID=UPI0003B3DF40
Uncharacterized protein {ECO:0000313|EMBL:KFN50751.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
conserved hypothethical protein, SAM-dependent methyltransferase domain
Ig9238_scaffold_108149_5
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5179..5604
DNA (426bp) protein (142aa)
hypothetical protein Tax=alpha proteobacterium SCGC AAA015-O19 RepID=UPI00037DC00D
Uncharacterized protein {ECO:0000313|EMBL:BAQ71615.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidophilum (Rhodobacter sulfidophilus).;"
Ig9238_scaffold_108149_6
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5688..8336)
DNA (2649bp) protein (883aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN50749.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
RNA helicase
ATP-dependent helicase HrpB bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Ig9238_scaffold_108149_7
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8524..9222
DNA (699bp) protein (233aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJT RepID=UPI00037AAA87
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
Ig9238_scaffold_108149_8
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9222..9692
DNA (471bp) protein (157aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJT RepID=UPI0003747D24
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
Ig9238_scaffold_108149_9
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9692..9847
DNA (156bp) protein (52aa)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_108149_10
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10079..11128
DNA (1050bp) protein (350aa)
preprotein translocase subunit TatD Tax=Xanthomonas sacchari RepID=UPI000262ACE4
Preprotein translocase subunit TatD {ECO:0000313|EMBL:KGM53157.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
preprotein translocase subunit TatD
Ig9238_scaffold_108149_11
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11287..12999
DNA (1713bp) protein (571aa)
ggt3; gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltransferase bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
Ig9238_scaffold_108149_12
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13160..14074
DNA (915bp) protein (305aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN42689.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypothetical protein XsacN4_04556 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Ig9238_scaffold_108149_13
unknown

Not on your lists

14192..15193
DNA (1002bp) protein (334aa)

This feature has no annotations

Ig9238_scaffold_108149_14
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15549..17033)
DNA (1485bp) protein (495aa)
ATPase Tax=Arenimonas oryziterrae RepID=UPI0003B4090B
Uncharacterized protein {ECO:0000313|EMBL:KFN50687.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
ATPase AAA
Ig9238_scaffold_108149_15
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17189..18250
DNA (1062bp) protein (354aa)
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
Ig9238_scaffold_108149_16
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18247..19293
DNA (1047bp) protein (349aa)
hypothetical protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036192AA
Uncharacterized protein {ECO:0000313|EMBL:KFL35736.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
Ig9238_scaffold_108149_17
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

19483..19854
DNA (372bp) protein (124aa)
Putative uncharacterized protein Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EMU3_CHLPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE03571.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain BS1).;"
Ig9238_scaffold_108149_18
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20028..20618)
DNA (591bp) protein (197aa)
Probable fusion protein Tax=Pseudoalteromonas luteoviolacea B = ATCC 29581 RepID=L8D5J0_9GAMM
peroxidase
Tax=BJP_IG2102_Porphyrobacter_62_18
Ig9238_scaffold_108149_19
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20878..22290)
DNA (1413bp) protein (471aa)
glutamate synthase subunit beta Tax=Arenimonas oryziterrae RepID=UPI0003B337F2
Uncharacterized protein {ECO:0000313|EMBL:KFN44229.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
glutamate synthase, small subunit
Ig9238_scaffold_108149_20
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22287..26774)
DNA (4488bp) protein (1496aa)
glutamate synthase (EC:1.4.7.1)
glutamate synthase subunit alpha Tax=Arenimonas oryziterrae RepID=UPI0003B75EDC
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_108149_21
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27082..28350)
DNA (1269bp) protein (423aa)
hypothetical protein Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036D09FB
secretion protein HlyD family protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_108149_22
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28546..30708)
DNA (2163bp) protein (721aa)
Colicin V secretion ABC transporter ATP-binding protein Tax=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) RepID=Q2P4U1_XANOM
Uncharacterized protein {ECO:0000313|EMBL:KFN45144.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
colicin V secretion ABC transporter ATP-binding protein
Ig9238_scaffold_108149_23
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31391..32260)
DNA (870bp) protein (290aa)
Transposase, IS4 family Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WE41_VEREI
transposase, IS4 family protein
Transposase, IS4 family {ECO:0000313|EMBL:ABM55898.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
Displaying 23 items

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