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Ig8144_scaffold_2032

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig8144_scaffold_2032_1
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..247
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X2G4_DESRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV68611.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
Ig8144_scaffold_2032_2
unknown

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comp(578..1009)
DNA (432bp) protein (144aa)

This feature has no annotations

Ig8144_scaffold_2032_3
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

Not on your lists

1341..4940
DNA (3600bp) protein (1200aa)
AMP-dependent synthetase and ligase bin=GWF2_OP3_38_59 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
2-acylglycerophosphoethanolamine acyltransferase
Tax=RifOxyB12_full_OP3_50_7_curated
Ig8144_scaffold_2032_4
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4994..5752)
DNA (759bp) protein (253aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Bacillus bataviensis LMG 21833 RepID=K6E7B9_9BACI
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Ig8144_scaffold_2032_5

Not on your lists

comp(5749..6879)
DNA (1131bp) protein (377aa)
PilT protein domain protein Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R0F5_ISOPI
Marine sediment metagenome DNA, contig: S03H2_S04624 {ECO:0000313|EMBL:GAH56243.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PilT protein domain-containing protein
Ig8144_scaffold_2032_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6901..8181)
DNA (1281bp) protein (427aa)
Protein kinase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZG1_ROSS1
protein kinase
Protein kinase {ECO:0000313|EMBL:ABQ92014.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Ig8144_scaffold_2032_7
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

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comp(8178..10052)
DNA (1875bp) protein (625aa)
ornithine decarboxylase inhibitor-putative sigma54 transciptional regulator Tax=Gemmata obscuriglobus RepID=UPI00016C585F
Fis family transcriptional regulator
Tax=RBG_16_Planctomycetes_59_8_curated
Ig8144_scaffold_2032_8

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comp(10056..11309)
DNA (1254bp) protein (418aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein Tax=planctomycete KSU-1 RepID=I3IRC1_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKL97611.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
deoxyguanosinetriphosphate triphosphohydrolase-like protein
Ig8144_scaffold_2032_9

Not on your lists

comp(11306..11806)
DNA (501bp) protein (167aa)
Diadenosine tetraphosphate (Ap4A) hydrolase, HIT-like Tax=uncultured Acidilobus sp. JCHS RepID=V4KC03_9CREN
Marine sediment metagenome DNA, contig: S01H1_S04539 {ECO:0000313|EMBL:GAF89499.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Ig8144_scaffold_2032_trna_1
unknown

Not on your lists

comp(12372..12444)
DNA (73bp)
transferRNA Gly
Ig8144_scaffold_2032_10
RIFOXYD2_FULL_PER_ii_58_15_curated, PER-ii, Bacteria

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comp(12645..13526)
DNA (882bp) protein (294aa)
Short-chain dehydrogenase/reductase SDR bin=GWC2_Planctomycetes_45_44 species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
short-chain dehydrogenase/reductase sdr
Tax=RIFOXYD2_FULL_PER_ii_58_15_curated
Ig8144_scaffold_2032_11

Not on your lists

13641..13970
DNA (330bp) protein (110aa)
nucleotidyltransferase (EC:2.7.7.-)
Marine sediment metagenome DNA, contig: S01H1_L04610 {ECO:0000313|EMBL:GAF68690.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA polymerase beta domain protein region bin=GWC2_Syntrophobacterales_56_13 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Ig8144_scaffold_2032_12
unknown

Not on your lists

comp(14033..14143)
DNA (111bp) protein (37aa)

This feature has no annotations

Ig8144_scaffold_2032_13
Selenomonas sp. oral taxon 149, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14136..15710)
DNA (1575bp) protein (525aa)
Uncharacterized protein Tax=Selenomonas sp. oral taxon 149 str. 67H29BP RepID=E0P202_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFM22193.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. oral taxon 149 str. 67H29BP.;"
putative protein Cbei_0202
Ig8144_scaffold_2032_14
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(15737..16987)
DNA (1251bp) protein (417aa)
3-oxoacyl-ACP synthase (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Rhodopirellula europaea 6C RepID=M2A3A0_9PLAN
Tax=RBG_16_Planctomycetes_43_13_curated
Ig8144_scaffold_2032_15
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17087..17317)
DNA (231bp) protein (77aa)
Acyl carrier protein Tax=planctomycete KSU-1 RepID=I3IHH3_9PLAN
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
acyl carrier protein
Ig8144_scaffold_2032_16
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17636..17917
DNA (282bp) protein (94aa)
50S ribosomal protein L31 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=RL31_ANADE
rpmE; 50S ribosomal protein L31
Tax=RBG_16_Anaeromyxobacter_69_14_curated
Ig8144_scaffold_2032_17
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17933..19033
DNA (1101bp) protein (367aa)
Peptide chain release factor 1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GDV2_SPITZ
Peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
Ig8144_scaffold_2032_18
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19026..19934
DNA (909bp) protein (303aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
Release factor glutamine methyltransferase Tax=Rhodopirellula baltica SH28 RepID=K5E4W8_RHOBT
hemK; hemK protein
Ig8144_scaffold_2032_19
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20012..21304
DNA (1293bp) protein (431aa)
DNA methylase N-4/N-6 domain protein Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I2F5_DESAP
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:ACA59238.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Displaying 20 items

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