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Ig8144_scaffold_5567

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig8144_scaffold_5567_1
unknown

Not on your lists

comp(249..467)
DNA (219bp) protein (73aa)

This feature has no annotations

Ig8144_scaffold_5567_2
unknown

Not on your lists

comp(1205..1780)
DNA (576bp) protein (192aa)

This feature has no annotations

Ig8144_scaffold_5567_3
unknown

Not on your lists

comp(2037..3449)
DNA (1413bp) protein (471aa)

This feature has no annotations

Ig8144_scaffold_5567_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3691..6333)
DNA (2643bp) protein (881aa)
Uncharacterized protein Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KBV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40185.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycoside hydrolase family 2 protein
Ig8144_scaffold_5567_5
unknown

Not on your lists

6535..7227
DNA (693bp) protein (231aa)

This feature has no annotations

Ig8144_scaffold_5567_6
unknown

Not on your lists

7545..8186
DNA (642bp) protein (214aa)

This feature has no annotations

Ig8144_scaffold_5567_7
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

8236..9591
DNA (1356bp) protein (452aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXT1_9BACT
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
Ig8144_scaffold_5567_8
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9990..11009)
DNA (1020bp) protein (340aa)
Uncharacterized protein Tax=Setaria italica RepID=K3ZV26_SETIT
hypothetical protein
Tax=CG_Flavo_02
Ig8144_scaffold_5567_9
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(11144..12520)
DNA (1377bp) protein (459aa)
PilQ bin=GWA2_OP3_53_43 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
type IV pilus secretin PilQ
Tax=GWA2_WOR_2_47_8_curated
Ig8144_scaffold_5567_10
unknown

Not on your lists

comp(12517..13203)
DNA (687bp) protein (229aa)

This feature has no annotations

Ig8144_scaffold_5567_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13200..13760)
DNA (561bp) protein (187aa)
Type IV pilus biogenesis protein PilO Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H855_ANADF
type IV pilus biogenesis protein PilO
Type IV pilus biogenesis protein PilO {ECO:0000313|EMBL:ABS24901.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Ig8144_scaffold_5567_12
unknown

Not on your lists

comp(13757..14551)
DNA (795bp) protein (265aa)

This feature has no annotations

Ig8144_scaffold_5567_13
GWC2_OP11_39_8_plus, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(14538..15734)
DNA (1197bp) protein (399aa)
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:KKR30413.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWC2_39_8.;"
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM bin=bin9_gal15 species=Meiothermus timidus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
Ig8144_scaffold_5567_14
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16439..17065)
DNA (627bp) protein (209aa)
Tax=RBG_13_Planctomycetes_63_9_curated
Ig8144_scaffold_5567_15
unknown

Not on your lists

comp(17098..18381)
DNA (1284bp) protein (428aa)

This feature has no annotations

Ig8144_scaffold_5567_16
unknown

Not on your lists

comp(18378..19481)
DNA (1104bp) protein (368aa)

This feature has no annotations

Ig8144_scaffold_5567_17
unknown

Not on your lists

comp(19487..19891)
DNA (405bp) protein (135aa)

This feature has no annotations

Ig8144_scaffold_5567_18
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(20010..20684)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SUB1_PLAL2
hypothetical protein
Tax=GWA2_RIF03_38_11_curated
Ig8144_scaffold_5567_19
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(20704..21396)
DNA (693bp) protein (231aa)
Putative uncharacterized protein bin=GWC2_Planctomycetes_45_44 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=GWA2_RIF03_38_11_curated
Ig8144_scaffold_5567_20
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(21435..22499)
DNA (1065bp) protein (355aa)
general secretion pathway protein F bin=bin1_lowGC species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
gspF; general secretion pathway protein F
Tax=GWA2_RIF03_38_11_curated
Ig8144_scaffold_5567_21
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(22496..24388)
DNA (1893bp) protein (631aa)
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB bin=RBG_19FT_COMBO_GAL15_69_19 species=Hippea alviniae genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
general secretory pathway protein E
Tax=RBG_16_RIF03_38_11_curated
Ig8144_scaffold_5567_22
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(24434..24769)
DNA (336bp) protein (112aa)
putative anti-sigma factor antagonist bin=bin7_NC10_sister species=Dietzia cinnamea genus=Dietzia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
anti-sigma-factor antagonist
Tax=GWA2_RIF03_38_11_curated
Ig8144_scaffold_5567_23
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24766..26412)
DNA (1647bp) protein (549aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=Synechocystis sp. PCC 7509 RepID=L8KUX7_9SYNC
GAF sensor-containing diguanylate cyclase
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:AEE97093.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
Ig8144_scaffold_5567_24
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(26402..28027)
DNA (1626bp) protein (542aa)
Uncharacterized protein Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1X2_PELTS
hypothetical protein
Tax=RBG_16_RIF03_38_11_curated
Ig8144_scaffold_5567_25
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(28024..28491)
DNA (468bp) protein (156aa)
hypothetical protein Tax=Streptomyces RepID=UPI00037EC083
response regulator receiver protein
Tax=RBG_16_RIF03_38_11_curated
Ig8144_scaffold_5567_26
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(28525..30579)
DNA (2055bp) protein (685aa)
Sensor protein yycG Tax=Paenibacillus alvei A6-6i-x RepID=S9SZ11_PAEAL
multi-sensor signal transduction histidine kinase
Tax=GWA2_RIF03_38_11_curated
Ig8144_scaffold_5567_27
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(31029..31910)
DNA (882bp) protein (294aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme bin=GWF2_Lentisphaerae_57_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
pilD; type IV prepilin-like proteins leader peptide processing enzyme
Tax=GWF2_Lentisphaerae_57_35_curated
Ig8144_scaffold_5567_28

Not on your lists

32671..32985
DNA (315bp) protein (105aa)
Marine sediment metagenome DNA, contig: S01H4_L05723 {ECO:0000313|EMBL:GAG85554.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA polymerase beta domain protein region bin=GWF2_Lentisphaerae_49_21 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
DNA polymerase beta domain-containing protein region
Ig8144_scaffold_5567_29
RLO_PLX_64_10, Bacteria

Not on your lists

32982..33371
DNA (390bp) protein (130aa)
UPF0332 protein TM_1000 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Ig8144_scaffold_5567_30
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

33380..33628
DNA (249bp) protein (83aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003775140
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
Displaying 30 items

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