ggKbase home page

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single

Search features with annotation key words

Displaying items 1-30 of 236 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_1
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..91)
-----------------
DNA (90bp)
protein (30aa)
Transposase n=1 Tax=Enterococcus faecalis ERV73 RepID=J6QS01_ENTFL
IS110, transposase
Transposase {ECO:0000313|EMBL:EJV27883.1}; TaxID=1134798 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ERV81.;"
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_2
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

379..1917
-----------------
DNA (1539bp)
protein (513aa)
HNH endonuclease n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZWE2_MAHA5
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:AEE97551.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1995..2984
-----------------
DNA (990bp)
protein (330aa)
SCP-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSL7_9FIRM
SCP-like protein {ECO:0000313|EMBL:EFB74303.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_4
unknown

Not on your lists

2981..3478
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_5
Halobacillus karajensis, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3739..4257
-----------------
DNA (519bp)
protein (173aa)
DNA N-6-adenine-methyltransferase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CI40_DESK7
Phage N-6-adenine-methyltransferase {ECO:0000313|EMBL:CDQ22611.1}; TaxID=195088 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus karajensis.;"
DNA N-6-adenine-methyltransferase
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_6
unknown

Not on your lists

4281..4889
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_7
unknown

Not on your lists

4911..5369
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_8
unknown

Not on your lists

5388..6653
-----------------
DNA (1266bp)
protein (422aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_9
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6672..7628
-----------------
DNA (957bp)
protein (319aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M184_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64441.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
StbA protein.
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_10
unknown

Not on your lists

7685..8125
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_11
unknown

Not on your lists

comp(8187..8717)
-----------------
DNA (531bp)
protein (177aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_12
unknown

Not on your lists

9165..9662
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_13
unknown

Not on your lists

9643..10740
-----------------
DNA (1098bp)
protein (366aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_14
unknown

Not on your lists

10916..11365
-----------------
DNA (450bp)
protein (150aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_15
unknown

Not on your lists

11358..11840
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_16
unknown

Not on your lists

11871..12902
-----------------
DNA (1032bp)
protein (344aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_17
unknown

Not on your lists

13052..13648
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_18
unknown

Not on your lists

13645..15471
-----------------
DNA (1827bp)
protein (609aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_19
unknown

Not on your lists

15611..16405
-----------------
DNA (795bp)
protein (265aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_20
Petrotoga mobilis, Petrotoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

16723..17985
-----------------
DNA (1263bp)
protein (421aa)
HNH endonuclease n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BHK2_PETMO
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ABX31874.1}; TaxID=403833 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Petrotoga.;" source="Petrotoga mobilis (strain DSM 10674 / SJ95).;"
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_21
unknown

Not on your lists

18036..19490
-----------------
DNA (1455bp)
protein (485aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19522..20685
-----------------
DNA (1164bp)
protein (388aa)
Putative trigger factor n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZF92_9FIRM
Putative trigger factor {ECO:0000313|EMBL:EFQ08212.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
tig; Trigger factor
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20874..21638
-----------------
DNA (765bp)
protein (255aa)
Single-stranded DNA-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJS6_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
single-strand binding protein
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_24
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21759..23576
-----------------
DNA (1818bp)
protein (606aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99591.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
MoxR-like ATPases
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_25
unknown

Not on your lists

comp(23627..23854)
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_26
unknown

Not on your lists

comp(23857..24339)
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_27
unknown

Not on your lists

comp(24355..25617)
-----------------
DNA (1263bp)
protein (421aa)

This feature has no annotations

aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_28

Not on your lists

comp(25619..26479)
-----------------
DNA (861bp)
protein (287aa)
Cobyrinic acid ac-diamide synthase (Fragment) n=1 Tax=human gut metagenome RepID=K1T065_9ZZZZ
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EKC61049.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
cobyrinic acid a,c-diamide synthase
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_29

Not on your lists

comp(27058..28689)
-----------------
DNA (1632bp)
protein (544aa)
Replication initiator protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TVC9_9ZZZZ
Replication initiator protein {ECO:0000313|EMBL:EKC73783.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
repB3; replication initiation protein repB3
aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single_30
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31034..31606
-----------------
DNA (573bp)
protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NYW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11461.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
Displaying items 1-30 of 236 in total

View Taxonomy