ggKbase home page

BML_coassembly_scaffold_13_prodigal-single

Search features with annotation key words

Displaying items 1-30 of 482 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BML_coassembly_scaffold_13_prodigal-single_1
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

3..572
DNA (570bp) protein (190aa)
GMP reductase id=2425853 bin=GWF1_Tenericute_35_14 species=unknown genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
IMP dehydrogenase/GMP reductase
Tax=BJP_IG2102_Acholeplasmatales_34_18
BML_coassembly_scaffold_13_prodigal-single_2
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

634..2535
DNA (1902bp) protein (634aa)
molecular chaperone DnaK n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036928B1
dnaK; molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
BML_coassembly_scaffold_13_prodigal-single_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2604..3029
DNA (426bp) protein (142aa)
Putative small heat shock protein, hsp20 family protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EDC0_9SPHN
Small heat shock protein IbpA {ECO:0000313|EMBL:AKH43712.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
molecular chaperone
BML_coassembly_scaffold_13_prodigal-single_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3079..3381
DNA (303bp) protein (101aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EYX7_9CLOT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ATP-dependent Clp protease adaptor protein ClpS
BML_coassembly_scaffold_13_prodigal-single_5
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3378..3929
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IYL9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ08191.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
Heme oxygenase
BML_coassembly_scaffold_13_prodigal-single_6
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3916..4602
DNA (687bp) protein (229aa)
phycocyanobilin:ferredoxin oxidoreductase, PcyA-like (EC:1.3.7.5)
Putative phycocyanobilin:ferredoxin oxidoreductase, PcyA-like {ECO:0000313|EMBL:CAL75167.1}; EC=1.3.7.5 {ECO:0000313|EMBL:CAL75167.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
Putative phycocyanobilin:ferredoxin oxidoreductase, PcyA-like n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YMP1_BRASO
BML_coassembly_scaffold_13_prodigal-single_7
unknown

Not on your lists

4613..6226
DNA (1614bp) protein (538aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_8
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

6311..6772
DNA (462bp) protein (154aa)
Curli production assembly/transport component n=1 Tax=Pelagibacter phage HTVC008M RepID=M1HLM9_9CAUD
Curli production assembly/transport component {ECO:0000313|EMBL:AGE60348.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
BML_coassembly_scaffold_13_prodigal-single_9
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

6772..7659
DNA (888bp) protein (296aa)
Curli production assembly/transport component n=1 Tax=Pelagibacter phage HTVC008M RepID=M1ICK2_9CAUD
Curli production assembly/transport component {ECO:0000313|EMBL:AGE60349.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
csgG; curli production assembly/transport component CsgG
BML_coassembly_scaffold_13_prodigal-single_10
unknown

Not on your lists

7683..7874
DNA (192bp) protein (64aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_11
unknown

Not on your lists

7904..8557
DNA (654bp) protein (218aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_12
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

8559..9653
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Pelagibacter phage HTVC008M RepID=M1ID94_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGE60351.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
uncharacterized protein conserved in bacteria
BML_coassembly_scaffold_13_prodigal-single_13
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9676..11034
DNA (1359bp) protein (453aa)
Putative uncharacterized protein id=3306444 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=GWF2_Bacteroidetes_49_14_curated
BML_coassembly_scaffold_13_prodigal-single_14
unknown

Not on your lists

11031..11219
DNA (189bp) protein (63aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_15
unknown

Not on your lists

11280..11438
DNA (159bp) protein (53aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_16
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11484..12329
DNA (846bp) protein (282aa)
ser/threonine protein phosphatase n=1 Tax=Hirschia maritima RepID=UPI00037433ED
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACT59308.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418).;"
BML_coassembly_scaffold_13_prodigal-single_17
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

12402..13112
DNA (711bp) protein (237aa)
glycosyl transferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4ACD4
Glycosyl transferase, family 2 {ECO:0000313|EMBL:KKT90261.1}; TaxID=1618662 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
glycosyl transferase family protein
BML_coassembly_scaffold_13_prodigal-single_18
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13197..15242
DNA (2046bp) protein (682aa)
guanylate cyclase (EC:4.6.1.1)
Putative transmembrane sensor domain protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CWI4_9BRAD
Putative transmembrane sensor domain protein {ECO:0000313|EMBL:EJN14124.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
BML_coassembly_scaffold_13_prodigal-single_19
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

comp(15245..15643)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Pelagibacter phage HTVC008M RepID=M1ID90_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGE60346.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
BML_coassembly_scaffold_13_prodigal-single_20
unknown

Not on your lists

comp(15648..15857)
DNA (210bp) protein (70aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_21
unknown

Not on your lists

comp(15841..16038)
DNA (198bp) protein (66aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_22
unknown

Not on your lists

comp(16025..16195)
DNA (171bp) protein (57aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_23
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

comp(16195..16473)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pelagibacter phage HTVC008M RepID=M1IP38_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGE60345.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
BML_coassembly_scaffold_13_prodigal-single_24
unknown

Not on your lists

16563..16868
DNA (306bp) protein (102aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_25
unknown

Not on your lists

16858..17391
DNA (534bp) protein (178aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17451..17996
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003825756
Muramidase (Phage lambda lysozyme) {ECO:0000313|EMBL:CDN96091.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
BML_coassembly_scaffold_13_prodigal-single_27
unknown

Not on your lists

17993..18148
DNA (156bp) protein (52aa)

This feature has no annotations

BML_coassembly_scaffold_13_prodigal-single_28
Candidatus Kinetoplastibacterium desouzaii, Kinetoplastibacterium, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18110..18844)
DNA (735bp) protein (245aa)
stearoyl-CoA desaturase (delta-9 desaturase) (EC:1.14.19.1)
Stearoyl-CoA desaturase (Delta-9 desaturase) {ECO:0000313|EMBL:AGF46790.1}; EC=1.14.19.1 {ECO:0000313|EMBL:AGF46790.1};; TaxID=1208919 species="Bacteria; Proteobacteria; Betaproteobacteria; Kinetoplastibacterium.;" source="Candidatus Kinetoplastibacterium desouzaii TCC079E.;"
Stearoyl-CoA desaturase (Delta-9 desaturase) n=1 Tax=Candidatus Kinetoplastibacterium desouzaii TCC079E RepID=M1M3H2_9PROT
BML_coassembly_scaffold_13_prodigal-single_29
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19073..19276
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BA546
cold-shock protein
Cold shock-like protein CspA {ECO:0000313|EMBL:EGY61525.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
BML_coassembly_scaffold_13_prodigal-single_30
Acinetobacter phage 133, T4likevirus, Caudovirales, Viruses

Not on your lists

19672..20301
DNA (630bp) protein (210aa)
Putative Seg-like homing endonuclease GIY-YIG family n=1 Tax=Acinetobacter phage 133 RepID=D9I671_9CAUD
Putative Seg-like homing endonuclease GIY-YIG family {ECO:0000313|EMBL:ADJ19452.1}; TaxID=279006 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Acinetobacter phage 133.;"
Displaying items 1-30 of 482 in total

View Taxonomy