ggKbase home page

LacPavin_0818_WC55_scaffold_2946_prodigal-single

Search features with annotation key words

Displaying items 1-30 of 387 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LacPavin_0818_WC55_scaffold_2946_prodigal-single_1
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1823)
DNA (1821bp) protein (607aa)
Collagen triple helix repeat-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5L2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AIZ41748.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
triple helix repeat-containing collagen
LacPavin_0818_WC55_scaffold_2946_prodigal-single_2
Prochlorococcus phage P-SSM2, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(1827..2501)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Prochlorococcus phage P-SSM2 RepID=R9S845_BPPRM
Uncharacterized protein {ECO:0000313|EMBL:AGN12251.1}; TaxID=536454 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Prochlorococcus phage P-SSM5.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_3
Prochlorococcus phage P-SSM2, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(2503..5106)
DNA (2604bp) protein (868aa)
Phage tail fiber-like protein n=1 Tax=Prochlorococcus phage P-SSM2 RepID=Q58MY3_BPPRM
Phage tail fiber-like protein {ECO:0000313|EMBL:AAX44399.1}; Predicted protein {ECO:0000313|EMBL:ACY75897.1}; TaxID=268746 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Prochlorococcus phage P-SSM2.;"
YadA domain-containing protein
LacPavin_0818_WC55_scaffold_2946_prodigal-single_4
Synechococcus phage ACG-2014j, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(5103..6137)
DNA (1035bp) protein (345aa)
Virion structural protein n=1 Tax=Synechococcus phage S-PM2 RepID=Q5GQW7_BPSYP
Structural protein {ECO:0000313|EMBL:AIX23977.1}; TaxID=1493514 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Synechococcus phage ACG-2014j.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_5
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

comp(6140..6907)
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Synechococcus phage S-SSM7 RepID=M4PZ19_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH07644.1}; TaxID=682650 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-SSM6a.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_6
unknown

Not on your lists

comp(6921..7481)
DNA (561bp) protein (187aa)

This feature has no annotations

LacPavin_0818_WC55_scaffold_2946_prodigal-single_7
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

comp(7478..9712)
DNA (2235bp) protein (745aa)
Baseplate hub + tail lysozyme n=2 Tax=Synechococcus phage S-SSM7 RepID=E3SKT4_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH07642.1}; TaxID=682650 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-SSM6a.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_8
Synechococcus phage S-RSM4, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(9705..9914)
DNA (210bp) protein (70aa)
Conserved hypothetical cyanobacterial protein n=1 Tax=Synechococcus phage S-RSM4 RepID=C7BVJ4_9CAUD
Conserved hypothetical cyanobacterial protein {ECO:0000313|EMBL:CAR63423.1}; TaxID=555387 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Synechococcus phage S-RSM4.;"
hypothetical protein
LacPavin_0818_WC55_scaffold_2946_prodigal-single_9
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

comp(9925..11235)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=2 Tax=Synechococcus phage S-SSM7 RepID=M4PR89_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH07640.1}; TaxID=682650 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-SSM6a.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_10
Synechococcus phage ACG-2014i, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(11236..13041)
DNA (1806bp) protein (602aa)
Gp99 n=1 Tax=Brochothrix phage A9 RepID=D9J0P6_9CAUD
Late control gene D protein {ECO:0000313|EMBL:AIX26729.1}; TaxID=1493513 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Synechococcus phage ACG-2014i.;"
yfjB; hypothetical protein
LacPavin_0818_WC55_scaffold_2946_prodigal-single_11
unknown

Not on your lists

comp(13044..14852)
DNA (1809bp) protein (603aa)

This feature has no annotations

LacPavin_0818_WC55_scaffold_2946_prodigal-single_12
Prochlorococcus phage P-SSM2, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(14842..15018)
DNA (177bp) protein (59aa)
Base plate hub assembly catalyst gp51 n=2 Tax=Prochlorococcus phage P-SSM2 RepID=Q58MY9_BPPRM
Base plate hub assembly catalyst {ECO:0000313|EMBL:AGN12256.1}; TaxID=536454 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Prochlorococcus phage P-SSM5.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_13
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(15021..15746)
DNA (726bp) protein (242aa)
Baseplate hub subunit n=1 Tax=Synechococcus phage S-SM2 RepID=E3SIQ6_9CAUD
Baseplate hub subunit {ECO:0000313|EMBL:ADO97354.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_14
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

comp(15771..16487)
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Synechococcus phage S-SSM7 RepID=M4PR85_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH07635.1}; TaxID=682650 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-SSM6a.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_15
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

16517..16981
DNA (465bp) protein (155aa)
Head completion protein n=2 Tax=Synechococcus phage S-SSM7 RepID=E3SKS6_9CAUD
Head completion protein {ECO:0000313|EMBL:ADO98074.1}; TaxID=445686 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SSM7.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_16
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

16978..17496
DNA (519bp) protein (173aa)
Gp2 n=2 Tax=Synechococcus phage S-SSM7 RepID=E3SKS5_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH07633.1}; TaxID=682650 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-SSM6a.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_17
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

17497..19047
DNA (1551bp) protein (517aa)
Baseplate tail tube cap n=2 Tax=Synechococcus phage S-SSM7 RepID=E3SKS4_9CAUD
Baseplate tail tube cap {ECO:0000313|EMBL:ADO98072.1}; TaxID=445686 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SSM7.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_18
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

19049..19960
DNA (912bp) protein (304aa)
Base plate wedge component n=2 Tax=Synechococcus phage S-SSM7 RepID=E3SKS3_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH07631.1}; TaxID=682650 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-SSM6a.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_19
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

19957..20250
DNA (294bp) protein (98aa)
Base plate wedge component n=2 Tax=Synechococcus phage S-SSM7 RepID=E3SKS3_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH07631.1}; TaxID=682650 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-SSM6a.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_20
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(20283..21212)
DNA (930bp) protein (310aa)
SsDNA binding protein n=1 Tax=Synechococcus phage S-SM2 RepID=E3SIQ0_9CAUD
SsDNA binding protein {ECO:0000313|EMBL:ADO97348.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_21
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

comp(21300..21596)
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Synechococcus phage S-SSM7 RepID=M4PZ05_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH07629.1}; TaxID=682650 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-SSM6a.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_22
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(21632..22222)
DNA (591bp) protein (197aa)
Loader of gp41 DNA helicase n=1 Tax=Synechococcus phage S-SM2 RepID=E3SIP7_9CAUD
Loader of gp41 DNA helicase {ECO:0000313|EMBL:ADO97345.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_23
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(22219..22479)
DNA (261bp) protein (87aa)
Late promoter transcription accessory protein n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJG3_9CAUD
Late promoter transcription accessory protein {ECO:0000313|EMBL:ADO97611.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_24
Prochlorococcus phage P-SSM2, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(22481..23152)
DNA (672bp) protein (224aa)
Exonuclease n=2 Tax=Prochlorococcus phage P-SSM2 RepID=Q58N04_BPPRM
Uncharacterized protein {ECO:0000313|EMBL:AGN12269.1}; TaxID=536454 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Prochlorococcus phage P-SSM5.;"
hypothetical protein
LacPavin_0818_WC55_scaffold_2946_prodigal-single_25
Prochlorococcus phage P-SSM2, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(23149..23916)
DNA (768bp) protein (256aa)
P-starvation inducible protein n=2 Tax=Prochlorococcus phage P-SSM2 RepID=Q58M28_BPPRM
PhoH {ECO:0000313|EMBL:AGN12271.1}; TaxID=536454 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Prochlorococcus phage P-SSM5.;"
phoH; Phosphate starvation-inducible protein PhoH
LacPavin_0818_WC55_scaffold_2946_prodigal-single_26
Synechococcus phage S-SKS1, Caudovirales, Viruses

Not on your lists

comp(23930..24178)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Synechococcus phage S-SKS1 RepID=M4QS99_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH31778.1}; TaxID=754042 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Synechococcus phage S-SKS1.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_27
Cyanophage S-RSM88, Caudovirales, Viruses

Not on your lists

comp(24209..24856)
DNA (648bp) protein (216aa)
Hypothetical-Protein | belonging to T4-LIKE GC: 867 n=2 Tax=Myoviridae RepID=Q7Y4H3_BPSYP
Putative uncharacterized protein y {ECO:0000313|EMBL:CAF32462.1}; TaxID=264985 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-RSM88.;"
NUMOD3 motif protein
LacPavin_0818_WC55_scaffold_2946_prodigal-single_28
unknown

Not on your lists

comp(24954..25112)
DNA (159bp) protein (53aa)

This feature has no annotations

LacPavin_0818_WC55_scaffold_2946_prodigal-single_29
Synechococcus phage ACG-2014f, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(25119..25871)
DNA (753bp) protein (251aa)
thymidylate synthase (FAD) (EC:2.1.1.148)
thymidylate synthase n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00030EC1AC
Flavin-dependent thymidylate synthase {ECO:0000313|EMBL:AIX42498.1}; TaxID=1493511 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Synechococcus phage ACG-2014f.;"
LacPavin_0818_WC55_scaffold_2946_prodigal-single_30
unknown

Not on your lists

comp(25873..26037)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying items 1-30 of 387 in total

View Taxonomy