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M01_scaffold_2_1202_curated_prodigal-single

Search features with annotation key words

Displaying items 121-150 of 569 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
M01_scaffold_2_1202_curated_prodigal-single_119
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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147113..147817
DNA (705bp) protein (235aa)
transcriptional regulator n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B4FC4E
Transcriptional regulator {ECO:0000313|EMBL:KHS58875.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
response regulator receiver
M01_scaffold_2_1202_curated_prodigal-single_120
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

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147891..149186
DNA (1296bp) protein (432aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
GHKL domain protein n=1 Tax=Eubacterium sp. AS15 RepID=J5H0L4_9FIRM
histidine kinase
M01_scaffold_2_1202_curated_prodigal-single_121
Atopobium sp. oral taxon 199, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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149371..149916
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3A6F6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EPD77822.1}; TaxID=1203602 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 199 str. F0494.;"
DivIVA family protein
M01_scaffold_2_1202_curated_prodigal-single_122
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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150264..152237
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BCV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88904.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
M01_scaffold_2_1202_curated_prodigal-single_123
unknown

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152443..153675
DNA (1233bp) protein (411aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_124
unknown

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153703..155211
DNA (1509bp) protein (503aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_125
unknown

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155300..156175
DNA (876bp) protein (292aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_126
Thalassiosira pseudonana, Thalassiosira, Thalassiosirales, Coscinodiscophyceae, Bacillariophyta, Eukaryota

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156429..159746
DNA (3318bp) protein (1106aa)
Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C7X4_THAPS
Uncharacterized protein {ECO:0000313|EMBL:EED90187.1}; TaxID=35128 species="Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira.;" source="Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).;"
cell surface protein
M01_scaffold_2_1202_curated_prodigal-single_127
Clostridium sp. CAG:451, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(159834..161009)
DNA (1176bp) protein (392aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:451 RepID=R7KDQ5_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:451.;"
rpoD; RNA polymerase sigma factor rpoD
M01_scaffold_2_1202_curated_prodigal-single_128
Tupaia chinensis, Tupaia, Scandentia, Mammalia, Chordata, Metazoa

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comp(161373..162668)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Chelonia mydas RepID=M7BXW7_CHEMY
Uncharacterized protein {ECO:0000313|EMBL:ELW55634.1}; TaxID=246437 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia.;" source="Tupaia chinensis (Chinese tree shrew).;"
hypothetical protein
M01_scaffold_2_1202_curated_prodigal-single_129
unknown

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comp(162678..164147)
DNA (1470bp) protein (490aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_130
unknown

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comp(164323..166479)
DNA (2157bp) protein (719aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_131
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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166731..167387
DNA (657bp) protein (219aa)
Uncharacterized protein n=5 Tax=Enterococcus faecium RepID=R2BDN8_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOM13421.1}; TaxID=1158550 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0261.;"
hypothetical protein
M01_scaffold_2_1202_curated_prodigal-single_132
unknown

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167474..167938
DNA (465bp) protein (155aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_133
unknown

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168084..169103
DNA (1020bp) protein (340aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_134
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169262..173380
DNA (4119bp) protein (1373aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003703843
endopeptidase Clp ATP-binding chain A
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
M01_scaffold_2_1202_curated_prodigal-single_135
Rattus norvegicus, Rattus, Rodentia, Mammalia, Chordata, Metazoa

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173683..174819
DNA (1137bp) protein (379aa)
PREDICTED: dentin sialophosphoprotein n=1 Tax=Odobenus rosmarus divergens RepID=UPI0002C59208
Dentin sialophosphoprotein {ECO:0000313|Ensembl:ENSRNOP00000002946}; TaxID=10116 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.;" source="Rattus norvegicus (Rat).;"
M01_scaffold_2_1202_curated_prodigal-single_136
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

175024..178452
DNA (3429bp) protein (1143aa)
penicillin-binding protein 1A (EC:2.4.1.129)
Penicillin-binding protein 1A {ECO:0000313|EMBL:ABG05237.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABG05237.1};; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Penicillin-binding protein 1A n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATP1_RUBXD
M01_scaffold_2_1202_curated_prodigal-single_137
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

178494..179876
DNA (1383bp) protein (461aa)
Sortase, SrtB family {ECO:0000313|EMBL:EWC94743.1}; EC=3.4.22.71 {ECO:0000313|EMBL:EWC94743.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
Sortase, SrtB family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8N3_ATOPD
sortase
M01_scaffold_2_1202_curated_prodigal-single_138
unknown

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179989..180402
DNA (414bp) protein (138aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_139
unknown

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180549..181391
DNA (843bp) protein (281aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_140
unknown

Not on your lists

181532..183040
DNA (1509bp) protein (503aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_141
unknown

Not on your lists

183170..183661
DNA (492bp) protein (164aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_142
unknown

Not on your lists

183759..184172
DNA (414bp) protein (138aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_143
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184258..185127
DNA (870bp) protein (290aa)
tRNAHis-5'-guanylyltransferase {ECO:0000313|EMBL:KIG15832.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
M01_scaffold_2_1202_curated_prodigal-single_144

Not on your lists

185223..186623
DNA (1401bp) protein (467aa)
metal dependent phosphohydrolase (EC:2.7.7.25)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BUW3_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75608.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
M01_scaffold_2_1202_curated_prodigal-single_trna_2
unknown

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187329..187402
DNA (74bp)
transferRNA Thr
M01_scaffold_2_1202_curated_prodigal-single_145

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187430..188116
DNA (687bp) protein (229aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL91884.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=4054380 bin=GWB1_Spirochaetes_59_5 species=Salmonella phage FelixO1 genus=Felixounalikevirus taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
HNH endonuclease
M01_scaffold_2_1202_curated_prodigal-single_trna_3
unknown

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188147..188220
DNA (74bp)
transferRNA Asn
M01_scaffold_2_1202_curated_prodigal-single_trna_4
unknown

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188249..188325
DNA (77bp)
transferRNA Ile
Displaying items 121-150 of 569 in total

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