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M01_scaffold_2_1202_curated_prodigal-single

Search features with annotation key words

Displaying items 1-30 of 569 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
M01_scaffold_2_1202_curated_prodigal-single_1
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

86..4450
DNA (4365bp) protein (1455aa)
Cna protein B-type domain protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDP3_9ACTN
Cna protein B-type domain protein {ECO:0000313|EMBL:EEA89683.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Cna B domain-containing protein
M01_scaffold_2_1202_curated_prodigal-single_2
unknown

Not on your lists

4684..4953
DNA (270bp) protein (90aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5023..6534)
DNA (1512bp) protein (504aa)
Putative PTS system, N-acetylglucosamine-specific IIBC component n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZKA7_9FIRM
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2)
Putative PTS system, N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:EFQ06422.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
M01_scaffold_2_1202_curated_prodigal-single_4
unknown

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6954..7271
DNA (318bp) protein (106aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_5
unknown

Not on your lists

comp(7442..7795)
DNA (354bp) protein (118aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_6
unknown

Not on your lists

comp(7853..8032)
DNA (180bp) protein (60aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_7
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8245..8949)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MGK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70155.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
M01_scaffold_2_1202_curated_prodigal-single_8
Bifidobacterium thermacidophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9213..10871
DNA (1659bp) protein (553aa)
Cation transporter n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RH63_9BIFI
cation transporter
Cation transporter {ECO:0000313|EMBL:KFJ04875.1}; TaxID=79262 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium thermacidophilum subsp. thermacidophilum.;"
M01_scaffold_2_1202_curated_prodigal-single_9
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11100..12254
DNA (1155bp) protein (385aa)
Glycosyl transferase family 2 n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N852_CORGP
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEB07235.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
M01_scaffold_2_1202_curated_prodigal-single_10
unknown

Not on your lists

12466..12630
DNA (165bp) protein (55aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_11
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12892..13812)
DNA (921bp) protein (307aa)
EDD domain protein, DegV family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8P8_9ACTN
EDD domain protein, DegV family {ECO:0000313|EMBL:EEP44920.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
M01_scaffold_2_1202_curated_prodigal-single_12
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14117..15112)
DNA (996bp) protein (332aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Cytosine-specific methyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUS4_9CLOT
DNA-cytosine methyltransferase
M01_scaffold_2_1202_curated_prodigal-single_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15288..16262
DNA (975bp) protein (325aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
DNA-cytosine methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=2 Tax=Erysipelotrichaceae RepID=H1B1E9_9FIRM
M01_scaffold_2_1202_curated_prodigal-single_14
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16413..17645)
DNA (1233bp) protein (411aa)
Hydrophobic domain protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D3U6_9ACTN
Hydrophobic domain protein {ECO:0000313|EMBL:CDD84448.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
hypothetical protein
M01_scaffold_2_1202_curated_prodigal-single_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17822..18268
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJ41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98547.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
M01_scaffold_2_1202_curated_prodigal-single_16
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

18304..21510
DNA (3207bp) protein (1069aa)
Papain family cysteine protease n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XR49_9FIRM
Papain family cysteine protease {ECO:0000313|EMBL:CDD21529.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
citrate transporter
M01_scaffold_2_1202_curated_prodigal-single_17

Not on your lists

comp(21576..22454)
DNA (879bp) protein (293aa)
Putative uncharacterized protein B543L n=2 Tax=Chlorovirus RepID=A7IX68_PBCVN
Putative uncharacterized protein C487L {ECO:0000313|EMBL:ABU44032.1}; TaxID=380598 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; Chlorovirus; unclassified Chlorovirus.;" source="Paramecium bursaria Chlorella virus AR158 (PBCV-AR158).;"
type II DNA methylase protein
M01_scaffold_2_1202_curated_prodigal-single_18
unknown

Not on your lists

22536..23228
DNA (693bp) protein (231aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_19
unknown

Not on your lists

comp(23325..23633)
DNA (309bp) protein (103aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_20
unknown

Not on your lists

comp(23738..24445)
DNA (708bp) protein (236aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_21
unknown

Not on your lists

24793..25890
DNA (1098bp) protein (366aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_22
unknown

Not on your lists

26026..26235
DNA (210bp) protein (70aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_23
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26245..27012
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GV26_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY19644.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
M01_scaffold_2_1202_curated_prodigal-single_24
unknown

Not on your lists

27060..27743
DNA (684bp) protein (228aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_25
Coriobacteriaceae bacterium 68-1-3, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27740..28741)
DNA (1002bp) protein (334aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1531429 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae.;" source="Coriobacteriaceae bacterium 68-1-3.;"
Cytosine-specific methyltransferase n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RCG3_9BIFI
DNA methyltransferase
M01_scaffold_2_1202_curated_prodigal-single_26
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28731..29486)
DNA (756bp) protein (252aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1421016 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium aotearoense SCUT27.;"
Thymidylate kinase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VT16_THESW
thymidylate kinase
M01_scaffold_2_1202_curated_prodigal-single_27
unknown

Not on your lists

comp(29706..29963)
DNA (258bp) protein (86aa)

This feature has no annotations

M01_scaffold_2_1202_curated_prodigal-single_trna_1
unknown

Not on your lists

29968..30043
DNA (76bp)
transferRNA Met
M01_scaffold_2_1202_curated_prodigal-single_28
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30767..32476
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) RepID=B1W131_STRGG
TROVE domain-containing protein {ECO:0000313|EMBL:KDN81787.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
TROVE domain-containing protein
M01_scaffold_2_1202_curated_prodigal-single_29
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32597..33628)
DNA (1032bp) protein (344aa)
Glycosyl transferase family 2 n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WNF7_EGGLE
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACV54817.1}; TaxID=479437 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC; 11813 / VPI 0255) (Eubacterium lentum).;"
Displaying items 1-30 of 569 in total

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