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S2_012_000_R2_scaffold_0_prodigal-single_301

Organism: R2_PLASMID_CIR_59_76

RP 0 / 55 BSCG 4 / 51 ASCG 1 / 38
Location: 297494..298015

Top 3 Functional Annotations

Value Algorithm Source
Putative type IV pilin protein n=1 Tax=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) RepID=Q6D6L5_ERWCT similarity UNIREF
DB: UNIREF100
  • Identity: 29.9
  • Coverage: 147.0
  • Bit_score: 55
  • Evalue 4.40e-05
putative type IV pilin protein precursor similarity KEGG
DB: KEGG
  • Identity: 29.9
  • Coverage: 147.0
  • Bit_score: 55
  • Evalue 1.20e-05
Putative type IV pilin protein {ECO:0000313|EMBL:CAG74571.1}; TaxID=218491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia; carotovora subsp. atroseptica).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.9
  • Coverage: 147.0
  • Bit_score: 55
  • Evalue 6.20e-05

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Taxonomy

Pectobacterium atrosepticum → Pectobacterium → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGAGACACCAAATCAAAGGAGCACAAGGATTTACACTGATTGAATTGCTGTTGGTGTTGGGAGTTTTGGCACTCCTTTTGGTCGCCATGTTCGTGATCTACCCTACTGTTCGTACGGAAATGAGGGCCAACCGAGAAGTTGCCTTTATTACGGGGGTTCTGGCCAGATTCCAAACGCAGTTCCCTCAAAACAGTTACAGAGGGGTAGTGAACACTTGGAACGCTGCGCGGGGAACACAAGAGTGGGCGACCAGTCCTAACGGGTGGAACAACTGGACCATCGTCGAAGCGCAGAAGGTAGGAAACTATCCTCAGCAATGCTCTTCAGGTCGATGCACGCACCTTTGGGTTCAATTGTATTACCGCACCAGCGAAATGAGTCAGGACGAATGCCTAAAAATTATGACAAAACTGGGCGCAACGCTTCAAATGCCGGGCTATACCAACCCGGGCCCCTCCACATTCATTAGTCAATGCGACAAAGATTCCGGGCCGCTGTTCATCTCTCTTTTGACCCAATAA
PROTEIN sequence
Length: 174
MRHQIKGAQGFTLIELLLVLGVLALLLVAMFVIYPTVRTEMRANREVAFITGVLARFQTQFPQNSYRGVVNTWNAARGTQEWATSPNGWNNWTIVEAQKVGNYPQQCSSGRCTHLWVQLYYRTSEMSQDECLKIMTKLGATLQMPGYTNPGPSTFISQCDKDSGPLFISLLTQ*