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SR-VP_0-2_scaffold_141_316084_prodigal-single

Search features with annotation key words

Displaying items 1-30 of 718 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_316084_prodigal-single_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20..643
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3H3_SORC5
HNH endonuclease family protein {ECO:0000313|EMBL:AKF10028.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SR-VP_0-2_scaffold_141_316084_prodigal-single_2
Pseudomonas phage PMG1, D3likevirus, Caudovirales, Viruses

Not on your lists

708..1142
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas phage vB_PaeS_PMG1 RepID=H2BDJ0_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:AEX55957.1}; TaxID=1129146 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; D3likevirus.;" source="Pseudomonas phage PMG1.;"
hypothetical protein
SR-VP_0-2_scaffold_141_316084_prodigal-single_trna_1
unknown

Not on your lists

1119..1196
DNA (78bp)
transferRNA Pro
SR-VP_0-2_scaffold_141_316084_prodigal-single_3
unknown

Not on your lists

1197..1574
DNA (378bp) protein (126aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_4
Pseudomonas sp. ES3-33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1555..1989
DNA (435bp) protein (145aa)
diguanylate cyclase n=1 Tax=Pseudomonas fluorescens RepID=UPI00031E61C9
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KJH77371.1}; TaxID=1628833 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. ES3-33.;"
putative sensory box GGDEF/EAL domain-containing protein
SR-VP_0-2_scaffold_141_316084_prodigal-single_5
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1990..2646)
DNA (657bp) protein (219aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
Endonuclease III n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CB16_DESTA
putative endoIII-related endonuclease
SR-VP_0-2_scaffold_141_316084_prodigal-single_6
unknown

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comp(2633..3100)
DNA (468bp) protein (156aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_7
unknown

Not on your lists

3727..4389
DNA (663bp) protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM96317.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_0-2_scaffold_141_316084_prodigal-single_8
unknown

Not on your lists

4398..4595
DNA (198bp) protein (66aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_9
unknown

Not on your lists

4625..5281
DNA (657bp) protein (219aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_10
Pseudomonas phage PAK_P4, Caudovirales, Viruses

Not on your lists

comp(5282..5905)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Pseudomonas phage PAK_P4 RepID=V5JX98_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGR89469.1}; TaxID=1327966 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pseudomonas phage PAK_P4.;"
hypothetical protein
SR-VP_0-2_scaffold_141_316084_prodigal-single_trna_2
unknown

Not on your lists

5292..5377
DNA (86bp)
transferRNA Ser
SR-VP_0-2_scaffold_141_316084_prodigal-single_11
unknown

Not on your lists

comp(5938..6423)
DNA (486bp) protein (162aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7002..7643
DNA (642bp) protein (214aa)
Gp27 id=3256196 bin=GWB1_Spirochaetes_59_5 species=Bacillus phage G genus=unknown taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
SR-VP_0-2_scaffold_141_316084_prodigal-single_13
unknown

Not on your lists

7640..8164
DNA (525bp) protein (175aa)
P23 n=1 Tax=Myxococcus phage Mx8 RepID=Q94MU6_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKN86896.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_0-2_scaffold_141_316084_prodigal-single_14
unknown

Not on your lists

comp(8091..8720)
DNA (630bp) protein (210aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_trna_3
unknown

Not on your lists

8735..8819
DNA (85bp)
transferRNA Arg
SR-VP_0-2_scaffold_141_316084_prodigal-single_15
unknown

Not on your lists

8886..11108
DNA (2223bp) protein (741aa)
ATPase central domain-containing protein n=1 Tax=Metallosphaera cuprina (strain Ar-4) RepID=F4G0P4_METCR
Uncharacterized protein {ECO:0000313|EMBL:KKN65732.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATPase central domain-containing protein
SR-VP_0-2_scaffold_141_316084_prodigal-single_16
unknown

Not on your lists

11120..11914
DNA (795bp) protein (265aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_17
unknown

Not on your lists

11911..12246
DNA (336bp) protein (112aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_18
Acaryochloris marina, Acaryochloris, Chroococcales, Cyanobacteria, Bacteria

Not on your lists

12243..13085
DNA (843bp) protein (281aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
DNA adenine methylase n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0CDK6_ACAM1
dam; DNA adenine methylase
SR-VP_0-2_scaffold_141_316084_prodigal-single_19
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13125..13484
DNA (360bp) protein (120aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LH76_HALO1
Uncharacterized protein {ECO:0000313|EMBL:KFA89461.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
PAS/PAC sensor hybrid histidine kinase
SR-VP_0-2_scaffold_141_316084_prodigal-single_20
unknown

Not on your lists

13615..13914
DNA (300bp) protein (100aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_21
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13923..14666
DNA (744bp) protein (248aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; EC=4.1.1.23 {ECO:0000255|HAMAP-Rule:MF_01200};; OMP decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; Short=OMPDCase {ECO:0000255|HAMAP-Rule:MF_01200};; Short=OMPdecase {ECO:0000255|HAMAP-Rule:MF_01200};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=PYRF_ANADE
SR-VP_0-2_scaffold_141_316084_prodigal-single_22
unknown

Not on your lists

14785..15174
DNA (390bp) protein (130aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_23
Mycobacterium phage Myrna, Caudovirales, Viruses

Not on your lists

15171..15353
DNA (183bp) protein (61aa)
Gp84 n=1 Tax=Mycobacterium phage Myrna RepID=B5LJ90_9CAUD
Gp84 {ECO:0000313|EMBL:ACH62087.1}; TaxID=546805 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Mycobacterium phage Myrna.;"
SR-VP_0-2_scaffold_141_316084_prodigal-single_24
RIFCSPHIGHO2_12_FULL_OD1_Uhrbacteria_60_25_curated, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

15541..16059
DNA (519bp) protein (173aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_Uhrbacteria_60_25_curated
SR-VP_0-2_scaffold_141_316084_prodigal-single_trna_4
unknown

Not on your lists

16569..16644
DNA (76bp)
transferRNA SeC
SR-VP_0-2_scaffold_141_316084_prodigal-single_25
unknown

Not on your lists

16647..16850
DNA (204bp) protein (68aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_316084_prodigal-single_26
unknown

Not on your lists

16880..17215
DNA (336bp) protein (112aa)

This feature has no annotations

Displaying items 1-30 of 718 in total

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