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SR-VP_4-6_scaffold_141_5680703_prodigal-single

Search features with annotation key words

Displaying items 1-30 of 597 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_4-6_scaffold_141_5680703_prodigal-single_1
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1040)
-----------------
DNA (1038bp)
protein (346aa)
Glycosyl transferase|GT4 {ECO:0000313|EMBL:CDO58996.1}; EC=2.4.-.- {ECO:0000313|EMBL:CDO58996.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Glycoside hydrolase family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J179_9PROT
group 1 glycosyl transferase
SR-VP_4-6_scaffold_141_5680703_prodigal-single_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1040..1768)
-----------------
DNA (729bp)
protein (243aa)
putative Metallo-dependent phosphatases (EC:3.6.1.-)
Putative Metallo-dependent phosphatases {ECO:0000313|EMBL:CDL00068.1}; EC=3.6.1.- {ECO:0000313|EMBL:CDL00068.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Putative Metallo-dependent phosphatases n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6E4_9PROT
SR-VP_4-6_scaffold_141_5680703_prodigal-single_3
Ralstonia phage RSL1, Caudovirales, Viruses

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1903..4278
-----------------
DNA (2376bp)
protein (792aa)
Putative uncharacterized protein n=1 Tax=Ralstonia phage RSL1 RepID=B2ZY62_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:BAG41630.1}; TaxID=482058 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Ralstonia phage RSL1.;"
psrP; Large surface exposed glycoprotein PsrP
SR-VP_4-6_scaffold_141_5680703_prodigal-single_4
unknown

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comp(4456..4767)
-----------------
DNA (312bp)
protein (104aa)
Uncharacterized protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RIM4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKO01946.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
uncharacterized protein
SR-VP_4-6_scaffold_141_5680703_prodigal-single_5
unknown

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comp(4767..4934)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_trna_19
unknown

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comp(5049..5124)
-----------------
DNA (76bp)
transferRNA Glu
SR-VP_4-6_scaffold_141_5680703_prodigal-single_trna_18
unknown

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comp(5147..5223)
-----------------
DNA (77bp)
transferRNA Glu
SR-VP_4-6_scaffold_141_5680703_prodigal-single_6
Caulobacter phage CcrColossus, Caudovirales, Viruses

Not on your lists

comp(5229..5543)
-----------------
DNA (315bp)
protein (105aa)
Putative elongation factor EF-Ts domain protein n=1 Tax=Caulobacter phage CcrColossus RepID=K4K6E5_9CAUD
Putative elongation factor EF-Ts domain protein {ECO:0000313|EMBL:AFU88117.1}; TaxID=1211640 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Caulobacter phage CcrColossus.;"
SR-VP_4-6_scaffold_141_5680703_prodigal-single_trna_17
unknown

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comp(5642..5719)
-----------------
DNA (78bp)
transferRNA Pseudo
SR-VP_4-6_scaffold_141_5680703_prodigal-single_trna_16
unknown

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comp(5733..5809)
-----------------
DNA (77bp)
transferRNA Asp
SR-VP_4-6_scaffold_141_5680703_prodigal-single_7
unknown

Not on your lists

comp(5820..6686)
-----------------
DNA (867bp)
protein (289aa)
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ13_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKM15698.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_4-6_scaffold_141_5680703_prodigal-single_8
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7021..7473)
-----------------
DNA (453bp)
protein (151aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. pisi str. 1704B RepID=F3G865_PSESJ
Aeromonas salmonicida strain 09-0167 genomic island AsaGEI2a genomic sequence {ECO:0000313|EMBL:AIZ49685.1}; TaxID=29491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida subsp. salmonicida.;"
hypothetical protein
SR-VP_4-6_scaffold_141_5680703_prodigal-single_9
unknown

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comp(7485..7688)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_10
unknown

Not on your lists

7691..8563
-----------------
DNA (873bp)
protein (291aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_11
unknown

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comp(8560..8898)
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_12
unknown

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comp(8895..9080)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_13
unknown

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comp(9077..9271)
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_14
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9343..10140)
-----------------
DNA (798bp)
protein (266aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CB53_DESTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM26794.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
SR-VP_4-6_scaffold_141_5680703_prodigal-single_15
unknown

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comp(10199..11002)
-----------------
DNA (804bp)
protein (268aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_16
unknown

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comp(11028..12131)
-----------------
DNA (1104bp)
protein (368aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_17
unknown

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comp(12219..12980)
-----------------
DNA (762bp)
protein (254aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_18
Enterobacteria phage JSE, T4likevirus, Caudovirales, Viruses

Not on your lists

13079..13837
-----------------
DNA (759bp)
protein (253aa)
Homing endonuclease n=1 Tax=Enterobacteria phage JSE RepID=C4MYI3_9CAUD
Homing endonuclease {ECO:0000313|EMBL:ACL77964.1}; TaxID=576789 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Enterobacteria phage JSE.;"
SR-VP_4-6_scaffold_141_5680703_prodigal-single_19
unknown

Not on your lists

13827..14483
-----------------
DNA (657bp)
protein (219aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_20
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14663..15802
-----------------
DNA (1140bp)
protein (380aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JVK4_BURVG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO60307.1}; Flags: Precursor;; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
SR-VP_4-6_scaffold_141_5680703_prodigal-single_21
unknown

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15803..16120
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_22
unknown

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16117..16491
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_23
unknown

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16498..16863
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

SR-VP_4-6_scaffold_141_5680703_prodigal-single_24
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16860..17102
-----------------
DNA (243bp)
protein (81aa)
hypothetical protein n=1 Tax=Mycobacterium abscessus RepID=UPI0003661B63
Uncharacterized protein {ECO:0000313|EMBL:EUA71895.1}; TaxID=1299321 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii 1513.;"
SR-VP_4-6_scaffold_141_5680703_prodigal-single_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17099..17404
-----------------
DNA (306bp)
protein (102aa)
Peptidase S24/S26A/S26B, conserved region n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRL8_NIAKG
Peptidase S24/S26A/S26B, conserved region
Peptidase S24/S26A/S26B, conserved region {ECO:0000313|EMBL:AEW02165.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SR-VP_4-6_scaffold_141_5680703_prodigal-single_26
Cronobacter phage vB_CsaM_GAP32, Caudovirales, Viruses

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comp(17491..19683)
-----------------
DNA (2193bp)
protein (731aa)
Recombination endonuclease subunit n=1 Tax=Cronobacter phage vB_CsaM_GAP32 RepID=K4F9K8_9CAUD
Recombination endonuclease subunit {ECO:0000313|EMBL:AFC21690.1}; TaxID=1141136 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cronobacter phage vB_CsaM_GAP32.;"
Displaying items 1-30 of 597 in total

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