ggKbase home page

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single

Search features with annotation key words

Displaying items 91-120 of 246 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_91
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(89708..90964)
DNA (1257bp) protein (419aa)
Transposase, IS605 OrfB family n=3 Tax=Fusobacterium nucleatum RepID=C3WW37_FUSNU
IS605 OrfB family transposase
IS605 OrfB family transposase {ECO:0000313|EMBL:ERT40815.1}; TaxID=1204474 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum CTI-1.;"
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_92
Fervidobacterium nodosum, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(91635..93242)
DNA (1608bp) protein (536aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00002518}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00002518};; TaxID=381764 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1).;"
DNA-directed DNA polymerase n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=A7HLQ1_FERNB
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_93
unknown

Not on your lists

comp(93315..93716)
DNA (402bp) protein (134aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_94
unknown

Not on your lists

comp(93723..93953)
DNA (231bp) protein (77aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_95
Thermosipho africanus, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(94003..94632)
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Thermosipho africanus RepID=B7IG16_THEAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ75030.1}; TaxID=484019 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho africanus (strain TCF52B).;"
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_96
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94625..94900)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RMJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ39894.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Bacterial nucleoid DNA-binding protein
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_97
unknown

Not on your lists

comp(95102..95329)
DNA (228bp) protein (76aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_98
unknown

Not on your lists

comp(95326..95727)
DNA (402bp) protein (134aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_99
unknown

Not on your lists

comp(95724..96119)
DNA (396bp) protein (132aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_100
GWC1_OP11_40_9, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(96119..97297)
DNA (1179bp) protein (393aa)
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZC75_9FIRM
Primase protein {ECO:0000313|EMBL:KKR80136.1}; TaxID=1618430 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC1_40_9.;"
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_101
Caldicellulosiruptor owensensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(97312..97950)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002896C36
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ04384.1}; TaxID=632518 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL).;"
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_102
unknown

Not on your lists

comp(98132..98305)
DNA (174bp) protein (58aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_103
unknown

Not on your lists

comp(98306..99229)
DNA (924bp) protein (308aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_104
unknown

Not on your lists

comp(99243..100016)
DNA (774bp) protein (258aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_105
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(100073..101479)
DNA (1407bp) protein (469aa)
Putative DNA helicase {ECO:0000313|EMBL:GAK41972.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
Helicase domain protein id=4176674 bin=GWF2_Lentisphaerae_38_69 species=Methylosinus trichosporium genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
SNF2 family helicase
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_106
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101770..102591)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Alkalibacillus haloalkaliphilus RepID=UPI00031EE073
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02415.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_107
unknown

Not on your lists

comp(102626..102991)
DNA (366bp) protein (122aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_108
Selenomonas sp. oral taxon 137, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(102966..104861)
DNA (1896bp) protein (632aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=879310 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. oral taxon 137 str. F0430.;"
UvrD/REP helicase n=1 Tax=Selenomonas sp. oral taxon 137 str. F0430 RepID=E4LH43_9FIRM
ATP-dependent DNA helicase PcrA
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_109
unknown

Not on your lists

comp(104904..105101)
DNA (198bp) protein (66aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_110
unknown

Not on your lists

comp(105080..105442)
DNA (363bp) protein (121aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_111
unknown

Not on your lists

comp(105526..105912)
DNA (387bp) protein (129aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_112
Fusobacterium hwasookii, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(105943..106302)
DNA (360bp) protein (120aa)
Uncharacterized protein (Fragment) n=1 Tax=Fusobacterium periodonticum D10 RepID=K1GLE2_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EJU07430.1}; TaxID=1216362 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium hwasookii ChDC F128.;"
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_113
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(106319..107941)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG1X2-2 RepID=R8F7S2_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOO44413.1}; TaxID=1053174 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG1X2-2.;"
AAA ATPase central domain protein
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_114
unknown

Not on your lists

comp(107954..108742)
DNA (789bp) protein (263aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_115
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(108754..109335)
DNA (582bp) protein (194aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YYW1_NOSS1
anaerobic ribonucleoside-triphosphate reductase activating protein
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_116
unknown

Not on your lists

comp(109347..109553)
DNA (207bp) protein (69aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_117
unknown

Not on your lists

comp(109555..110235)
DNA (681bp) protein (227aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_118
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

comp(110248..111378)
DNA (1131bp) protein (377aa)
Erythrocyte binding protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2EUJ3_TRIVA
Erythrocyte binding protein, putative {ECO:0000313|EMBL:EAY03695.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_119
unknown

Not on your lists

comp(111395..112108)
DNA (714bp) protein (238aa)

This feature has no annotations

term1_saliva_scaffold_5_curated_closed_gap_prodigal-single_120
unknown

Not on your lists

comp(112105..112749)
DNA (645bp) protein (215aa)

This feature has no annotations

Displaying items 91-120 of 246 in total

View Taxonomy