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BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single

Search features with annotation key words

Displaying items 1-30 of 436 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_1

Not on your lists

comp(1..3438)
DNA (3438bp) protein (1146aa)
Uncharacterized protein n=1 Tax=Escherichia phage PBECO 4 RepID=L7TIL2_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:KKN58211.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_2

Not on your lists

comp(3488..3862)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN58212.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_3

Not on your lists

comp(3876..6224)
DNA (2349bp) protein (783aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN58213.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_4
unknown

Not on your lists

comp(6226..9468)
DNA (3243bp) protein (1081aa)

This feature has no annotations

BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_5
unknown

Not on your lists

comp(9472..9771)
DNA (300bp) protein (100aa)

This feature has no annotations

BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_6

Not on your lists

comp(9771..11279)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Cronobacter phage vB_CsaM_GAP32 RepID=K4F7G7_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKN58216.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_7
Escherichia phage 121Q, Caudovirales, Viruses

Not on your lists

11394..12284
DNA (891bp) protein (297aa)
RNA polymerase sigma factor n=1 Tax=Escherichia phage PBECO 4 RepID=L7TQF6_9VIRU
RNA polymerase sigma factor {ECO:0000313|EMBL:AIT14481.1}; TaxID=1555202 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Escherichia phage 121Q.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_8
unknown

Not on your lists

12304..13095
DNA (792bp) protein (264aa)

This feature has no annotations

BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_9
Klebsiella phage K64-1, Caudovirales, Viruses

Not on your lists

13092..14105
DNA (1014bp) protein (338aa)
Endonuclease subunit n=1 Tax=Enterobacteria phage vB_KleM-RaK2 RepID=H6X3P0_9CAUD
Endonuclease subunit {ECO:0000313|EMBL:BAQ02798.1}; TaxID=1439894 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Klebsiella phage K64-1.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_10

Not on your lists

14102..15868
DNA (1767bp) protein (589aa)
Recombination endonuclease subunit n=1 Tax=Cronobacter phage vB_CsaM_GAP32 RepID=K4F9K8_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKL88639.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_11
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15828..16772
DNA (945bp) protein (315aa)
Radical SAM domain protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4BAE3_TURPD
Radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:AFM14250.1}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H); (Leptospira parva).;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_12

Not on your lists

16769..18268
DNA (1500bp) protein (500aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM88956.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=4970938 bin=GWA2_Elusimicrobia_69_24 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
radical SAM protein
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_13
unknown

Not on your lists

18268..18792
DNA (525bp) protein (175aa)

This feature has no annotations

BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_14
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18789..19898
DNA (1110bp) protein (370aa)
Radical SAM domain protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4BAE3_TURPD
Radical SAM domain protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_15
unknown

Not on your lists

19895..20488
DNA (594bp) protein (198aa)

This feature has no annotations

BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_16
Sinorhizobium phage phiN3, T4likevirus, Caudovirales, Viruses

Not on your lists

20489..20929
DNA (441bp) protein (147aa)
NAD synthetase n=1 Tax=gamma proteobacterium SCGC AAA168-P09 RepID=UPI000381E3C7
NAD synthetase {ECO:0000313|EMBL:AKF13577.1}; TaxID=1647405 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Sinorhizobium phage phiN3.;"
hypothetical protein
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_17
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21418..21750)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Ahrensia sp. R2A130 RepID=E0MLI3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EFL90649.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_18
unknown

Not on your lists

comp(21750..22184)
DNA (435bp) protein (145aa)

This feature has no annotations

BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_19
unknown

Not on your lists

comp(22181..22675)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00037DB046
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_20
unknown

Not on your lists

comp(22677..22862)
DNA (186bp) protein (62aa)

This feature has no annotations

BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_21

Not on your lists

comp(22892..23728)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Cronobacter phage vB_CsaM_GAP32 RepID=K4F6V0_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKN00701.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_22
Pseudomonas phage Lu11, Caudovirales, Viruses

Not on your lists

23773..25977
DNA (2205bp) protein (735aa)
Putative endolysin n=1 Tax=Pseudomonas phage Lu11 RepID=I1TQ57_9CAUD
Putative endolysin {ECO:0000313|EMBL:AFH14587.1}; TaxID=1161927 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pseudomonas phage Lu11.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_23
Synechococcus phage ACG-2014f, T4likevirus, Caudovirales, Viruses

Not on your lists

25994..26503
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:AIX30769.1}; TaxID=1493511 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Synechococcus phage ACG-2014f.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_24

Not on your lists

26487..28316
DNA (1830bp) protein (610aa)
Portal vertex protein of head n=1 Tax=Cronobacter phage vB_CsaM_GAP32 RepID=K4F9K9_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKN44255.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_25
unknown

Not on your lists

28325..28543
DNA (219bp) protein (73aa)

This feature has no annotations

BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_26
Taeniopygia guttata, Taeniopygia, Passeriformes, Aves, Chordata, Metazoa

Not on your lists

28653..29486
DNA (834bp) protein (278aa)
Uncharacterized protein (Fragment) n=1 Tax=Taeniopygia guttata RepID=H1A3T4_TAEGU
Uncharacterized protein {ECO:0000313|Ensembl:ENSTGUP00000017547}; TaxID=59729 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.;" source="Taeniopygia guttata (Zebra finch) (Poephila guttata).;"
hypothetical protein
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_27

Not on your lists

29500..30126
DNA (627bp) protein (209aa)
Prohead core scaffolding protein and protease n=1 Tax=Escherichia phage PBECO 4 RepID=L7TQE4_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:KKN44258.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_28

Not on your lists

30136..31230
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Cronobacter phage vB_CsaM_GAP32 RepID=K4FB44_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKN44259.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_29

Not on your lists

31250..32467
DNA (1218bp) protein (406aa)
Precursor of major head subunit n=1 Tax=Cronobacter phage vB_CsaM_GAP32 RepID=K4F9L0_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KKN44260.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single_30
Sinorhizobium phage phiM19, T4likevirus, Caudovirales, Viruses

Not on your lists

32427..33377
DNA (951bp) protein (317aa)
Putative GIY-YIG family Seg-like homing endonuclease {ECO:0000313|EMBL:AKF13099.1}; TaxID=1647404 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Sinorhizobium phage phiM19.;"
Displaying items 1-30 of 436 in total

View Taxonomy