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RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single

Search features with annotation key words

Displaying items 1-30 of 834 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_1
unknown

Not on your lists

comp(24..410)
DNA (387bp) protein (129aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_2

Not on your lists

comp(413..1342)
DNA (930bp) protein (310aa)
fcl; GDP-L-fucose synthase (EC:1.1.1.271)
Putative gdp-l-fucose synthetase n=1 Tax=Rhipicephalus pulchellus RepID=L7M8L1_9ACAR
Uncharacterized protein {ECO:0000313|EMBL:KKL15800.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_3
unknown

Not on your lists

comp(1321..1617)
DNA (297bp) protein (99aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_4
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1619..2419)
DNA (801bp) protein (267aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Y0Z8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB50981.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
wcfB; putative fucosyl transferase
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_5
unknown

Not on your lists

comp(2416..3300)
DNA (885bp) protein (295aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_6
cyanobacterium endosymbiont of Epithemia turgida, Cyanobacteria, Bacteria

Not on your lists

comp(3356..3637)
DNA (282bp) protein (94aa)
putative GDP-L-fucose synthase
Putative GDP-L-fucose synthase {ECO:0000313|EMBL:BAP17635.1}; TaxID=1228987 species="Bacteria; Cyanobacteria.;" source="cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake; Yunoko.;"
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_7
Trichinella spiralis, Trichinella, Trichocephalida, Dorylaimia, Nematoda, Metazoa

Not on your lists

comp(3673..4290)
DNA (618bp) protein (206aa)
fcl; GDP-L-fucose synthase (EC:1.1.1.271)
GDP-L-fucose synthetase n=1 Tax=Trichinella spiralis RepID=E5S673_TRISP
GDP-L-fucose synthetase {ECO:0000313|EMBL:EFV59699.1}; TaxID=6334 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichinellidae; Trichinella.;" source="Trichinella spiralis (Trichina worm).;"
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_8
unknown

Not on your lists

comp(4292..5110)
DNA (819bp) protein (273aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_9
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(5117..5965)
DNA (849bp) protein (283aa)
id=4426133 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
Tax=GWF2_RBX1_35_9_curated
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_10
RHI_TM6_36_22, TM6, Bacteria

Not on your lists

comp(5952..6590)
DNA (639bp) protein (213aa)
methyltransferase fkbm family id=12818 bin=ACD17 species=ACD17 genus=ACD17 taxon_order=ACD17 taxon_class=ACD17 phylum=Clamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
methyltransferase fkbm family
Tax=RIFCSPHIGHO2_12_FULL_TM6_36_22_curated
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_11
Thalassiosira oceanica, Thalassiosira, Thalassiosirales, Coscinodiscophyceae, Bacillariophyta, Eukaryota

Not on your lists

comp(6644..7894)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Thalassiosira oceanica RepID=K0SUU5_THAOC
glycosyltransferase sugar-binding region containing DXD motif family protein
Uncharacterized protein {ECO:0000313|EMBL:EJK62057.1}; TaxID=159749 species="Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira.;" source="Thalassiosira oceanica (Marine diatom).;"
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_12
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(7953..9284)
DNA (1332bp) protein (444aa)
asnB; Asparagine synthase (Glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase id=4426092 bin=GWF2_OP9_related_35_9 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
Tax=GWF2_RBX1_35_9_curated
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_13
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(9293..10030)
DNA (738bp) protein (246aa)
id=4426132 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
Tax=GWF2_RBX1_35_9_curated
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_14
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(10036..10746)
DNA (711bp) protein (237aa)
Predicted glycosyltransferase (Glycogen phosphorylase), GT1 family id=4162947 bin=GWF2_OP9_related_35_9 species=Methanobrevibacter smithii genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
glycosyltransferase
Tax=GWF2_RBX1_35_9_curated
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_15
GWD2_OD1_38_42, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10743..11681)
DNA (939bp) protein (313aa)
Nucleotide sugar epimerase id=2110525 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Nucleotide sugar epimerase {ECO:0000313|EMBL:KKQ72067.1}; TaxID=1618637 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWD2_38_42.;"
UDP-glucose 4-epimerase
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_16
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11706..12731)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CM91_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49161.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Intron-associated endonuclease 1
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_17
unknown

Not on your lists

comp(12721..12888)
DNA (168bp) protein (56aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_18
unknown

Not on your lists

comp(12939..13100)
DNA (162bp) protein (54aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_19

Not on your lists

comp(13111..13911)
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FG75_9RHOB id=67877 bin=ACD48 species=Rhodobacterales bacterium HTCC2255 genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD67657.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_20
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13908..14615)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:1060 RepID=R5BH65_9BACE
Tax=GWA2_Bacteroidetes_30_7_curated
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_21
unknown

Not on your lists

comp(14628..14948)
DNA (321bp) protein (107aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_22
unknown

Not on your lists

comp(14941..15741)
DNA (801bp) protein (267aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_23
unknown

Not on your lists

comp(15748..16563)
DNA (816bp) protein (272aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_24
Cyanobium gracile, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16577..17380)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P7L1_CYAGP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY29367.1}; TaxID=292564 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium gracile (strain ATCC 27147 / PCC 6307).;"
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_25
unknown

Not on your lists

comp(17398..17862)
DNA (465bp) protein (155aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_26
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(17855..18538)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Sulfurimonas sp. AST-10 RepID=T0JQU5_9HELI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_27
unknown

Not on your lists

comp(18540..18740)
DNA (201bp) protein (67aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_28

Not on your lists

comp(18750..19598)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003606EAB
Uncharacterized protein {ECO:0000313|EMBL:KKN72159.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_29
unknown

Not on your lists

19706..20128
DNA (423bp) protein (141aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single_30
Colius striatus, Colius, Coliiformes, Aves, Chordata, Metazoa

Not on your lists

20163..20963
DNA (801bp) protein (267aa)
ISE/inbred ISE genomic scaffold, scaffold_pathogens_Hcontortus_scaffold_378 (Fragment) n=1 Tax=Haemonchus contortus RepID=U6PFT0_HAECO
X-linked retinitis pigmentosa GTPase regulator {ECO:0000313|EMBL:KFP29506.1}; Flags: Fragment;; TaxID=57412 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Coliiformes; Coliidae; Colius.;" source="Colius striatus (Speckled mousebird).;"
hypothetical protein
Displaying items 1-30 of 834 in total

View Taxonomy