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Ig5770_scaffold_296

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_296_1
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..121
DNA (120bp) protein (40aa)
Uncharacterized protein ORF91 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YDC0_9DELT
Uncharacterized protein ORF91 {ECO:0000313|EMBL:CBX28564.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
hypothetical protein
Ig5770_scaffold_296_trna_2
unknown

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comp(2322..2394)
DNA (73bp)
transferRNA Ala
Ig5770_scaffold_296_trna_1
unknown

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comp(2433..2506)
DNA (74bp)
transferRNA Ile
Ig5770_scaffold_296_16S_1
unknown

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comp(2629..4142)
DNA (1514bp)
16S ribosomal RNA (16S rRNA)
Ig5770_scaffold_296_2
candidate division Zixibacteria, Bacteria

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comp(2701..2982)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LGG8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EQB63338.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
hypothetical protein
Ig5770_scaffold_296_3
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4425..5606)
DNA (1182bp) protein (394aa)
UPF0272 protein Dtur_1544 id=4176861 bin=GWC2_Ignavibacteria_56_12 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_296_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5634..6902)
DNA (1269bp) protein (423aa)
3-Deoxy-D-manno-octulosonic-acid transferase id=4176862 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
kdtA; 3-Deoxy-D-manno-octulosonic-acid transferase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_296_5
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6899..7945)
DNA (1047bp) protein (349aa)
Glycosyl transferase family 9 id=1827314 bin=GWA2_Ignavibacteria_55_11 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
ADP-heptose--LPS heptosyltransferase
Tax=GWA2_Ignavibacteria_54_16_curated
Ig5770_scaffold_296_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8018..8569)
DNA (552bp) protein (184aa)
Appr-1-p processing domain protein id=2849648 bin=GWF2_OP3_43_52 species=Archaeoglobus veneficus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Appr-1-p processing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Ig5770_scaffold_296_7
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8585..10204)
DNA (1620bp) protein (540aa)
Gaf sensor signal transduction histidine kinase id=4927066 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
gaf sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_296_8
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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10347..12152
DNA (1806bp) protein (602aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRK5_9BACT
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
Ig5770_scaffold_296_9
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12170..13600
DNA (1431bp) protein (477aa)
Surface antigen (D15) id=4520570 bin=GWC2_Ignavibacteria_56_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_296_10
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13628..13948)
DNA (321bp) protein (107aa)
Translation initiation factor SUI1 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JTQ8_DESFR
Translation initiation factor SUI1 {ECO:0000313|EMBL:EFL52187.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
translation initiation factor SUI1 family protein
Ig5770_scaffold_296_11
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13973..15460)
DNA (1488bp) protein (496aa)
site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72)
DNA methyltransferase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EB83
Tax=GWF2_Bacteroidetes_40_14_curated
Ig5770_scaffold_296_12
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15460..15921)
DNA (462bp) protein (154aa)
transposase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002EB0CF0
transposase
Tax=CG_Flavo_01
Ig5770_scaffold_296_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16404..17648)
DNA (1245bp) protein (415aa)
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
Type I restriction modification DNA specificity domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEE2_9FIRM rbh
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EDS10331.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Ig5770_scaffold_296_14
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18106..19659)
DNA (1554bp) protein (518aa)
Putative uncharacterized protein id=4397270 bin=GWF2_Bacteroidetes_40_14 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
type iii restriction protein res subunit
Tax=RBG_13_Bacteroidetes_43_22_curated
Ig5770_scaffold_296_15
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19632..20879)
DNA (1248bp) protein (416aa)
type III restriction endonuclease subunit R n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EB80
Restriction endonuclease subunit R {ECO:0000313|EMBL:KFO66920.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
type I site-specific deoxyribonuclease
Ig5770_scaffold_296_16
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(20955..21671)
DNA (717bp) protein (239aa)
Pyridoxine 5'-phosphate synthase id=4650318 bin=GWA2_Ignavibacteria_55_11 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
pyridoxine 5'-phosphate synthase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_296_17
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21685..22635)
DNA (951bp) protein (317aa)
Uncharacterized protein id=3965388 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Ignavi_01
Ig5770_scaffold_296_18
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(22670..23269)
DNA (600bp) protein (200aa)
Microcompartments protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A5G7_MELRP
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:AFN75131.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
Ig5770_scaffold_296_19
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(23304..23597)
DNA (294bp) protein (98aa)
Microcompartments protein id=4520563 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
microcompartments protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_296_20
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

23757..26288
DNA (2532bp) protein (844aa)
hypothetical protein id=7201355 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein rbh
Tax=RIFOXYC12_FULL_TA06_54_24_curated
Ig5770_scaffold_296_21
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


26292..27107
DNA (816bp) protein (272aa)
Ribosomal RNA small subunit methyltransferase A id=4698195 bin=GWC2_Ignavibacteria_56_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
dimethyladenosine transferase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_296_22
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27202..28458)
DNA (1257bp) protein (419aa)
Natural resistance-associated macrophage protein n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VSQ1_THESW rbh
natural resistance-associated macrophage protein rbh
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:ETO39737.1}; TaxID=1421016 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium aotearoense SCUT27.;"
Ig5770_scaffold_296_23
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(28464..29762)
DNA (1299bp) protein (433aa)
Mg/Co/Ni transporter MgtE domain protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVH7_SYNAS
Mg2+/Co2+ transporter
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Ig5770_scaffold_296_24
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

30174..31031
DNA (858bp) protein (286aa)
PAP2 superfamily protein id=4698199 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
PAP2 superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_296_25
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(31090..33582)
DNA (2493bp) protein (831aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTR3_9BACT
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
Ig5770_scaffold_296_26
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

34043..35692
DNA (1650bp) protein (550aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003B5C179
sulfatase
Tax=RBG_16_RIF_WS3X_71_46_curated
Ig5770_scaffold_296_27
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

35896..36603
DNA (708bp) protein (236aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase id=4943503 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=GWA2_Ignavibacteria_54_16_curated
Displaying items 1-30 of 42 in total

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