ggKbase home page

Ig5770_scaffold_364

Search features with annotation key words

Displaying items 1-30 of 55 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_364_1
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(105..1253)
DNA (1149bp) protein (383aa)
Oxygen-independent coproporphyrinogen III oxidase id=4572974 bin=GWC2_Ignavibacteria_56_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Oxygen-independent coproporphyrinogen III oxidase
Tax=GWA2_Ignavibacteriae_55_25_curated
Ig5770_scaffold_364_2
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1266..2168)
DNA (903bp) protein (301aa)
Signal peptidase I id=1714646 bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
lepB; Signal peptidase I
Tax=BJP_IG2102_Ignavibacteriales_35_8
Ig5770_scaffold_364_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(2174..3085)
DNA (912bp) protein (304aa)
Signal peptidase I id=5015011 bin=GWA2_Ignavibacteria_55_11 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
lepB; Signal peptidase I
Tax=BJP_IG2069_Ignavibacteriae_38_11
Ig5770_scaffold_364_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3104..4900)
DNA (1797bp) protein (599aa)
Elongation factor 4 id=5015010 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
lepA; membrane GTPase LepA
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_364_5
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5074..7557)
DNA (2484bp) protein (828aa)
Uncharacterized protein id=5026845 bin=GWA2_Ignavibacteria_55_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_364_6
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7694..9100)
DNA (1407bp) protein (469aa)
SAM-dependent methyltransferase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANW4_IGNAJ
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AFH50671.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Ig5770_scaffold_364_7
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9198..10652)
DNA (1455bp) protein (485aa)
Aminoacyl-histidine dipeptidase id=2277978 bin=GWA2_Ignavibacteriae_54_16_partial species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
Aminoacylhistidine dipeptidase
Tax=GWA2_Ignavibacteria_54_16_curated
Ig5770_scaffold_364_8
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10679..11035)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALK4_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH49861.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Ig5770_scaffold_364_9
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11056..13080)
DNA (2025bp) protein (675aa)
Putative membrane protein id=4751192 bin=GWC2_Ignavibacteria_38_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein rbh
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Ig5770_scaffold_364_10
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13127..14044)
DNA (918bp) protein (306aa)
L-proline dehydrogenase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z2C7_MELRP
L-proline dehydrogenase
L-proline dehydrogenase {ECO:0000313|EMBL:AFN73305.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
Ig5770_scaffold_364_11
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14164..14706)
DNA (543bp) protein (181aa)
Nucleoside recognition domain-containing protein id=4445161 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
nucleoside recognition domain-containing protein
Tax=RBG_13_Ignavibacteria_36_8_curated
Ig5770_scaffold_364_12
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14703..15683)
DNA (981bp) protein (327aa)
hypothetical protein
Nucleoside recognition domain-containing protein id=4990959 bin=GWA2_Ignavibacteriae_54_16_partial species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
Tax=RBG_13_Ignavibacteria_36_8_curated
Ig5770_scaffold_364_13
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15817..16563)
DNA (747bp) protein (249aa)
hypothetical protein AcelC_09138 n=1 Tax=Acetivibrio cellulolyticus CD2 RepID=UPI0001E2F0DF id=717319 bin=RAAC39 species=Acetivibrio cellulolyticus genus=Acetivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Ignavi_02
Ig5770_scaffold_364_14
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16678..17235)
DNA (558bp) protein (186aa)
Uncharacterized protein id=2899459 bin=GWF2_Melioribacter_38_21 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Ig5770_scaffold_364_15
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17228..17617)
DNA (390bp) protein (130aa)
Putative translation initiation inhibitor id=4572957 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_364_16
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17630..18550)
DNA (921bp) protein (307aa)
ParB family chromosome partitioning protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJY9_IGNAJ
parB; ParB family chromosome partitioning protein
ParB family chromosome partitioning protein {ECO:0000313|EMBL:AFH49296.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Ig5770_scaffold_364_17
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18543..19340)
DNA (798bp) protein (266aa)
ParA family chromosome partitioning protein id=4572954 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
ParA family chromosome partitioning protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_364_18
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(19363..20040)
DNA (678bp) protein (226aa)
Metal-dependent hydrolase id=4194412 bin=GWF2_Ignavibacteria_33_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
metal-dependent hydrolase
Tax=GWF2_RIF_IGX_33_9_curated
Ig5770_scaffold_364_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

20298..21284
DNA (987bp) protein (329aa)
ATPase associated with various cellular activities AAA_3 id=1708001 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
ATPase associated with various cellular activities AAA_3
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ig5770_scaffold_364_20
unknown

Not on your lists

21390..21479
DNA (90bp) protein (30aa)

This feature has no annotations

Ig5770_scaffold_364_21
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21507..21761
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00036DBA11
Uncharacterized protein {ECO:0000313|EMBL:KHE90343.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
S23 ribosomal protein
Ig5770_scaffold_364_22
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

21817..22518
DNA (702bp) protein (234aa)
hypothetical protein AtheD1_14505 id=1708002 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ig5770_scaffold_364_23
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

22619..23650
DNA (1032bp) protein (344aa)
hypothetical protein AnHS1_06989 id=4824575 bin=GWA2_Bacteroidetes_42_15 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=CG_Bacteroid_01
Ig5770_scaffold_364_24
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23647..24639
DNA (993bp) protein (331aa)
N-terminal double-transmembrane domain-containing protein id=4173080 bin=GWF2_Bacteroidetes_41_9 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
Ig5770_scaffold_364_25
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

24636..25676
DNA (1041bp) protein (347aa)
von Willebrand factor A id=2298903 bin=GWB2_Ignavibacteria_35_12 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
membrane protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ig5770_scaffold_364_26
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

25673..26383
DNA (711bp) protein (237aa)
Tetratricopeptide TPR_2 repeat protein id=2298902 bin=GWB2_Ignavibacteria_35_12 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ig5770_scaffold_364_27
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

26385..28280
DNA (1896bp) protein (632aa)
Putative uncharacterized protein id=2298901 bin=GWB2_Ignavibacteria_35_12 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ig5770_scaffold_364_28
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

28277..29032
DNA (756bp) protein (252aa)
Tetratricopeptide repeat protein id=2298900 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ig5770_scaffold_364_29
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

29108..31090
DNA (1983bp) protein (661aa)
histidine kinase (EC:2.7.3.-); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] id=16980375 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
histidine kinase
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
Ig5770_scaffold_364_30
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31094..32494
DNA (1401bp) protein (467aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1Y9N8_9DELT rbh
Fis family two component sigma-54 specific transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Displaying items 1-30 of 55 in total

View Taxonomy