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Ig5770_scaffold_116

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Displaying items 1-30 of 102 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_116_1
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(256..804)
DNA (549bp) protein (183aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
2'-5' RNA ligase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZJW1_THASP
2'-5' RNA ligase
Ig5770_scaffold_116_2
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(797..1276)
DNA (480bp) protein (160aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivoran
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Azoarcus toluclasticus RepID=UPI0003649D72
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Ig5770_scaffold_116_3
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1279..1986)
DNA (708bp) protein (236aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Thauera sp. 63 RepID=N6XET7_9RHOO
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_4
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2009..3268
DNA (1260bp) protein (420aa)
MgtC/SapB transporter n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EL3_DECAR rbh
MgtC/SapB transporter
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_5
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3314..4228
DNA (915bp) protein (305aa)
hypothetical protein
UPF0103/Mediator of ErbB2-driven cell motility-containing protein id=1905962 bin=GWE2_Gallionellales_58_10 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_6
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4221..4805
DNA (585bp) protein (195aa)
AMMECR1 protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EL5_DECAR
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_7
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4781..5878
DNA (1098bp) protein (366aa)
Radical SAM domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSL1_ACCPU
radical SAM family protein
Radical SAM family protein {ECO:0000313|EMBL:BAO29562.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_116_8
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5973..7205
DNA (1233bp) protein (411aa)
ATPase n=1 Tax=Thauera sp. 63 RepID=N6YEC8_9RHOO rbh
AAA family ATPase
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
Ig5770_scaffold_116_9
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7391..9097)
DNA (1707bp) protein (569aa)
Diguanylate cyclase n=2 Tax=Thauera RepID=C4ZM33_THASP rbh
diguanylate cyclase rbh
Tax=BJP_IG2103_Rhodocyclales_63_50
Ig5770_scaffold_116_10
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9094..10131)
DNA (1038bp) protein (346aa)
Extracellular solute-binding protein family 1 n=2 Tax=Thauera RepID=C4ZM34_THASP rbh
family 1 extracellular solute-binding protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
Ig5770_scaffold_116_11
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10136..11527)
DNA (1392bp) protein (464aa)
Cysteine--tRNA ligase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4C2_AZOSB
cysS; cysteinyl-tRNA synthetase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_12
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11653..12813
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI0003657ED5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO29116.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_116_13
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12810..14033
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI17_AZOSU
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_14
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14133..14705
DNA (573bp) protein (191aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thauera sp. 63 RepID=N6X7D2_9RHOO
peptidyl-prolyl cis-trans isomerase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_15
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14702..15196
DNA (495bp) protein (165aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HL0_DECAR
peptidyl-prolyl cis-trans isomerase, cyclophilin type
Tax=BJP_IG2103_Dechloromonas_63_51
Ig5770_scaffold_116_16
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15232..15969
DNA (738bp) protein (246aa)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJN6_9PROT
UDP-2,3-diacylglucosamine hydrolase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_17
Calditerrivibrio nitroreducens, Calditerrivibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

16115..17458
DNA (1344bp) protein (448aa)
Rhodanese domain protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TG27_CALNY rbh
rhodanese domain-containing protein rbh
Rhodanese domain protein {ECO:0000313|EMBL:ADR18577.1}; Flags: Precursor;; TaxID=768670 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae.;" source="Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 /; Yu37-1).;"
Ig5770_scaffold_116_18
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17515..18099
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PV37_9RHOO
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
Ig5770_scaffold_116_19
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18266..20419)
DNA (2154bp) protein (718aa)
ATP-dependent RNA helicase DeaD n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZY2_AROAE rbh
deaD; ATP-dependent RNA helicase DeaD rbh
Tax=BJP_IG2103_Dechloromonas_63_51
Ig5770_scaffold_116_20
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20511..21827
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000379427A
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Ig5770_scaffold_116_21
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21761..22540)
DNA (780bp) protein (260aa)
tRNA pseudouridine synthase C (Fragment) n=1 Tax=sediment metagenome RepID=D9PMH4_9ZZZZ rbh
23S RNA-specific pseudouridylate synthase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_22
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22596..23267)
DNA (672bp) protein (224aa)
LuxR family transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AEI8_9PROT
two component LuxR family transcriptionalregulator
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_23
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23264..24568)
DNA (1305bp) protein (435aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B0E9_9PROT
GAF sensor signal transduction histidine kinase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_24
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24605..25168)
DNA (564bp) protein (188aa)
NUDIX hydrolase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HG2_DECAR
Zn-finger containing NTP pyrophosphohydrolase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_25
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25490..26671)
DNA (1182bp) protein (394aa)
thlA; beta-ketothiolase (EC:2.3.1.9)
Probable acetyl-coa acetyltransferase (Acetoacetyl-coa thiolase) {ECO:0000313|EMBL:CAL94789.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CAL94789.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Probable acetyl-coa acetyltransferase (Acetoacetyl-coa thiolase) n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K7I4_AZOSB
Ig5770_scaffold_116_26
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26850..27806)
DNA (957bp) protein (319aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z5A8_9RHOO
CobD/CbiB family protein
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_116_27
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27913..28434)
DNA (522bp) protein (174aa)
Putative nudix hydrolase YeaB n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GKT0_9PROT
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:BAO28920.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_116_28
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28521..29159)
DNA (639bp) protein (213aa)
Clan AA aspartic protease, TIGR02281 family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJA6_AZOSU
clan AA aspartic protease
Clan AA aspartic protease, TIGR02281 family {ECO:0000313|EMBL:AEV27575.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Ig5770_scaffold_116_29
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29168..29662)
DNA (495bp) protein (165aa)
UPF0234 protein CAP2UW1_3080 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUV8_ACCPU
nucleotide-binding protein
UPF0234 protein PG1C_10600 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Ig5770_scaffold_116_30
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29674..29991)
DNA (318bp) protein (106aa)
hypothetical protein; K09913 hypothetical protein id=12494601 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
Displaying items 1-30 of 102 in total

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