ggKbase home page

Ig5770_scaffold_421

Search features with annotation key words

Displaying items 1-30 of 72 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_421_1
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..180
DNA (180bp) protein (60aa)
Nitrous oxide reductase apoprotein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FQ7_DECAR
nosZ; nitrous-oxide reductase
Nitrous-oxide reductase {ECO:0000313|EMBL:BAO30355.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_421_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

279..596
DNA (318bp) protein (106aa)
Cytochrome c553 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJW0_AZOSU
cytochrome c553
Tax=CG_Rhodocyc_01
Ig5770_scaffold_421_3

Not on your lists

679..1413
DNA (735bp) protein (245aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EJW9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD98779.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cytochrome c class I rbh
Ig5770_scaffold_421_4
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1545..2528
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJV8_AZOSU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV27637.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Ig5770_scaffold_421_5
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2525..3919
DNA (1395bp) protein (465aa)
Periplasmic copper-binding protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y603_9RHOO
periplasmic copper-binding
Periplasmic copper-binding {ECO:0000313|EMBL:BAO30351.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_421_6
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3916..4821
DNA (906bp) protein (302aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FR6_DECAR rbh
napG; 4Fe-4S ferredoxin
4Fe-4S ferredoxin {ECO:0000313|EMBL:BAO30350.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_421_7
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4818..5795
DNA (978bp) protein (326aa)
NapH/MauN family ferredoxin-type protein n=1 Tax=Thauera phenylacetica B4P RepID=N6YZ71_9RHOO rbh
napH; NapH/MauN family ferredoxin-type protein
Tax=BJP_08E140C01_Dechloromonas_61_78
Ig5770_scaffold_421_8
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5796..6785
DNA (990bp) protein (330aa)
ABC transporter related protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FR8_DECAR rbh
ABC transporter related
ABC transporter related {ECO:0000313|EMBL:BAO30348.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_421_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6787..7254
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FR9_DECAR
hypothetical protein
Tax=CG_Rhodocyc_01
Ig5770_scaffold_421_10
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7441..8268
DNA (828bp) protein (276aa)
Putative ABC-2 type transport system permease protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FS0_DECAR rbh
ABC transporter permease rbh
Tax=BJP_IG2103_Dechloromonas_60_92
Ig5770_scaffold_421_11
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8316..8906
DNA (591bp) protein (197aa)
Thioredoxin n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FS1_DECAR
thioredoxin
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_421_12
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8903..9649
DNA (747bp) protein (249aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S7K3_PHAFV rbh
Ig5770_scaffold_421_13
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9911..10825
DNA (915bp) protein (305aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6ZBT2_9RHOO
1,4-dihydroxy-2-naphthoate octaprenyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_421_14
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10832..11698
DNA (867bp) protein (289aa)
Sodium symporter n=1 Tax=Thauera phenylacetica B4P RepID=N6YNC3_9RHOO
sodium symporter
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_421_15
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11704..12948
DNA (1245bp) protein (415aa)
Nitrous oxidase accessory protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFW1_9PROT rbh
nitrous oxidase accessory protein
Nitrous oxidase accessory protein {ECO:0000313|EMBL:BAO30343.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_421_16
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12945..13682
DNA (738bp) protein (246aa)
Cytochrome c class I n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNJ9_ACCPU
cytochrome c class I
Tax=BJP_08E140C01_Dechloromonas_61_78
Ig5770_scaffold_421_17
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13834..14718)
DNA (885bp) protein (295aa)
Cell division protein FtsX n=2 Tax=Thauera RepID=C4KDP1_THASP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_421_18
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14810..15454)
DNA (645bp) protein (215aa)
Cell division ATP-binding protein FtsE n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479N5_DECAR
cell division protein FtsE
Cell division protein FtsE {ECO:0000313|EMBL:AJP47517.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Ig5770_scaffold_421_19
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15460..17544)
DNA (2085bp) protein (695aa)
PAS domain S-box n=1 Tax=Thauera sp. 63 RepID=N6X279_9RHOO rbh
PAS domain S-box {ECO:0000313|EMBL:ENO75726.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
PAS domain S-box
Ig5770_scaffold_421_20
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17732..19351)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6S5_AZOSB
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
Ig5770_scaffold_421_21
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19558..19977)
DNA (420bp) protein (140aa)
predicted nucleic acid-binding protein, contains PIN domain
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_421_22
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19958..20209)
DNA (252bp) protein (84aa)
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_421_23
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20277..21266)
DNA (990bp) protein (330aa)
Signal recognition particle receptor FtsY n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJK2_AZOSU rbh
signal recognition particle-docking protein FtsY
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_421_24
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21354..22718
DNA (1365bp) protein (455aa)
peptidase M16 n=1 Tax=Methyloversatilis universalis RepID=UPI00036BD2D9
putative peptidase M16
Putative peptidase M16 {ECO:0000313|EMBL:BAO31087.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_421_25
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22729..24015
DNA (1287bp) protein (429aa)
Putative peptidase M16 n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RHK2_9RHOO rbh
peptidase M16, C-terminal:peptidase M16, N-terminal, partial
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_421_26
unknown

Not on your lists

24220..24492
DNA (273bp) protein (91aa)

This feature has no annotations

Ig5770_scaffold_421_27
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24489..24902
DNA (414bp) protein (138aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
Ribonuclease VapC n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z0H4_9GAMM
hypothetical protein
Ig5770_scaffold_421_28
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24899..25441
DNA (543bp) protein (181aa)
RNA methyltransferase, RsmD family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJK5_AZOSU
methyltransferase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_421_29
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25524..26024
DNA (501bp) protein (167aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035C7031
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_421_30
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26048..26296
DNA (249bp) protein (83aa)
Ferredoxin n=1 Tax=Thauera terpenica 58Eu RepID=S9ZKH6_9RHOO
ferredoxin
Ferredoxin {ECO:0000313|EMBL:BAO31083.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Displaying items 1-30 of 72 in total

View Taxonomy