ggKbase home page

Ig5770_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 53 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_127_1
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

comp(191..2500)
DNA (2310bp) protein (770aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1) rbh
Ribonucleoside-diphosphate reductase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0I9_THEOJ rbh
Tax=BJP_IG2103_ACD39_50_23
Ig5770_scaffold_127_2
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(2532..3623)
DNA (1092bp) protein (364aa)
3-dehydroquinate synthase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I3A0_DESAP
3-dehydroquinate synthase
Tax=BJP_IG2102_ACD39_51_10
Ig5770_scaffold_127_3
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(3623..4399)
DNA (777bp) protein (259aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] id=46800 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
yabD; deoxyribonuclease YabD (EC:3.1.21.-)
Tax=BJP_IG2102_ACD39_51_10
Ig5770_scaffold_127_4
CG_ACD39_01, ACD39, Bacteria

Not on your lists


comp(4418..6370)
DNA (1953bp) protein (651aa)
Methionyl-tRNA synthetase (EC:6.1.1.10)
UniRef90_A1HPS9 Methionyl-tRNA synthetase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPS9_9FIRM id=46801 bin=ACD39 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
Tax=CG_ACD39_01
Ig5770_scaffold_127_5
CG_ACD39_01, ACD39, Bacteria

Not on your lists

comp(6367..7854)
DNA (1488bp) protein (496aa)
Diguanylate cyclase id=4309660 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
diguanylate cyclase
Tax=CG_ACD39_01
Ig5770_scaffold_127_6
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7959..8942)
DNA (984bp) protein (328aa)
Response regulator n=1 Tax=uncultured bacterium RepID=K2CP09_9BACT
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:KJU85552.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
diguanylate cyclase
Ig5770_scaffold_127_7
unknown

Not on your lists

comp(9051..9341)
DNA (291bp) protein (97aa)

This feature has no annotations

Ig5770_scaffold_127_8
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

comp(9338..10483)
DNA (1146bp) protein (382aa)
glycosyl transferase group 1 id=48683 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
group 1 glycosyl transferase
Tax=GWC2_ACD39_50_8_curated
Ig5770_scaffold_127_9

Not on your lists

comp(10486..11286)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002E07B76
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:ADI23227.1}; TaxID=723591 species="Bacteria; environmental samples.;" source="uncultured nuHF2 cluster bacterium HF0770_13K08.;"
family 2 glycosyl transferase
Ig5770_scaffold_127_10
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11375..11857)
DNA (483bp) protein (161aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B524DB
cysteine methyltransferase
Ig5770_scaffold_127_11
CG_ACD39_01, ACD39, Bacteria

Not on your lists

12019..12783
DNA (765bp) protein (255aa)
Cytoplasmic protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRD6_9BACT
cytoplasmic protein
Tax=CG_ACD39_01
Ig5770_scaffold_127_12
CG_ACD39_01, ACD39, Bacteria

Not on your lists

12909..13859
DNA (951bp) protein (317aa)
ABC transporter n=1 Tax=uncultured bacterium RepID=K2C9I0_9BACT rbh
gldA; ABC transporter ATP-binding protein rbh
Tax=CG_ACD39_01
Ig5770_scaffold_127_13
CG_ACD39_01, ACD39, Bacteria

Not on your lists

13856..14566
DNA (711bp) protein (237aa)
nosY2; ABC-type transport system involved in multi-copper enzyme maturation, permease component; K01992 ABC-2 type transport system permease protein id=44495 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
ABC-2 type transporter
Tax=CG_ACD39_01
Ig5770_scaffold_127_14
CG_ACD39_01, ACD39, Bacteria

Not on your lists

14570..16168
DNA (1599bp) protein (533aa)
ABC-type uncharacterized transport system id=3749777 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Tax=CG_ACD39_01
Ig5770_scaffold_127_15
CG_ACD39_01, ACD39, Bacteria

Not on your lists

16172..17587
DNA (1416bp) protein (472aa)
Putative uncharacterized protein id=3749776 bin=GWC2_ACD39_50_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Tax=CG_ACD39_01
Ig5770_scaffold_127_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17863..18186
DNA (324bp) protein (108aa)
RNP-1 like RNA-binding protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SW19_PLAL2
RNP-1 like RNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Ig5770_scaffold_127_17
CG_ACD39_01, ACD39, Bacteria

Not on your lists

18383..19168
DNA (786bp) protein (262aa)
Putative AP endonuclease family 2 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJR7_9FIRM
TIM barrel protein, AP endonuclease family 2/xylose isomerase-like family
Tax=CG_ACD39_01
Ig5770_scaffold_127_18
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19195..19989)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002D9BABC
Crystallin {ECO:0000313|EMBL:KHD08330.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
crystallin
Ig5770_scaffold_127_19
CG_ACD39_01, ACD39, Bacteria

Not on your lists

20038..21441
DNA (1404bp) protein (468aa)
Tax=CG_ACD39_01
Ig5770_scaffold_127_20
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(21484..23127)
DNA (1644bp) protein (548aa)
Adenylate and guanylate cyclase catalytic domain-containing protein id=4586822 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
adenylate and guanylate cyclase catalytic domain-containing protein
Tax=BJP_IG2102_ACD39_51_10
Ig5770_scaffold_127_21
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

23306..26284
DNA (2979bp) protein (993aa)
Putative uncharacterized protein id=2711903 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein rbh
Tax=GWC2_ACD39_50_8_curated
Ig5770_scaffold_127_22
CG_ACD39_01, ACD39, Bacteria

Not on your lists

26287..27411
DNA (1125bp) protein (375aa)
Uncharacterized protein id=2625083 bin=GWC2_ACD39_50_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Tax=CG_ACD39_01
Ig5770_scaffold_127_23
CG_ACD39_01, ACD39, Bacteria

Not on your lists

27414..28913
DNA (1500bp) protein (500aa)
Radical SAM domain protein id=2625073 bin=GWC2_ACD39_50_8 species=Prosthecochloris aestuarii genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_ACD39_50_8 organism_group=ACD39
radical SAM domain-containing protein
Tax=CG_ACD39_01
Ig5770_scaffold_127_24
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

29114..31825
DNA (2712bp) protein (904aa)
Stage II sporulation E family protein id=4703302 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
serine phosphatase RsbU, regulator of sigma subunit
Tax=BJP_IG2103_ACD39_50_23
Ig5770_scaffold_127_25
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

31822..34698
DNA (2877bp) protein (959aa)
Stage II sporulation E family protein id=4703302 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
serine phosphatase RsbU, regulator of sigma subunit
Tax=BJP_IG2102_ACD39_51_10
Ig5770_scaffold_127_26
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

34731..35399
DNA (669bp) protein (223aa)
Methyltransferase family protein id=2414974 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
methyltransferase family protein
Tax=GWF2_Elusimicrobia_62_30_curated
Ig5770_scaffold_127_27
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

35402..36346
DNA (945bp) protein (315aa)
Radical SAM domain protein id=2414939 bin=GWA2_Elusimicrobia_69_24 species=Thermogladius cellulolyticus genus=Thermogladius taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
Ig5770_scaffold_127_28
RifOxyA12_full_Elusimicrobia_57_11_curated, Elusimicrobia, Bacteria

Not on your lists

36501..37766
DNA (1266bp) protein (422aa)
hypothetical protein id=2414937 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RifOxyA12_full_Elusimicrobia_57_11_curated
Ig5770_scaffold_127_29
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

37838..39070
DNA (1233bp) protein (411aa)
Major facilitator superfamily sugar transporter id=2414934 bin=GWA2_Elusimicrobia_69_24 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ywfA; efflux transporter
Tax=GWA2_Elusimicrobia_69_24_curated
Ig5770_scaffold_127_30
CG_ACD39_01, ACD39, Bacteria

Not on your lists

39376..39939
DNA (564bp) protein (188aa)
transmembrane_regions 7..24 id=44632 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
Tax=CG_ACD39_01
Displaying items 1-30 of 53 in total

View Taxonomy