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Ig5770_scaffold_101

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Displaying items 1-30 of 76 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_101_1
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4704219 bin=GWC2_Pelobacter_58_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
two component sigma-54 specific Fis family transcriptional regulator
Tax=RBG_16_RIF03_38_10_curated
Ig5770_scaffold_101_2
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(474..1859)
DNA (1386bp) protein (462aa)
Sigma-54-dependent transcriptional response regulator n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EA16_GEOBB rbh
sigma-54-dependent transcriptional response regulator rbh
Tax=GWD2_Desulfuromonadales_61_12_curated
Ig5770_scaffold_101_3
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1867..3369)
DNA (1503bp) protein (501aa)
Integral membrane sensor signal transduction histidine kinase id=4704220 bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
sensor histidine kinase, HAMP domain-containing, putative heme-binding site
Tax=GWC2_Pelobacteraceae_58_13_curated
Ig5770_scaffold_101_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(3543..4931)
DNA (1389bp) protein (463aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D id=4135172 bin=GWA2_Ignavibacteria-rel_35_8 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
glutamyl-tRNA(Gln) amidotransferase subunit D
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ig5770_scaffold_101_5
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4931..6844)
DNA (1914bp) protein (638aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E id=3439102 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
glutamyl-tRNA(Gln) amidotransferase subunit E
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Ig5770_scaffold_101_6
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6854..8377)
DNA (1524bp) protein (508aa)
Histidine ammonia-lyase id=4666976 bin=GWF2_Melioribacter_38_21 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hutH; histidine ammonia-lyase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Ig5770_scaffold_101_7
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9002..12265
DNA (3264bp) protein (1088aa)
OmpA-related protein id=2982121 bin=GWF2_Ignavibacteria_35_20 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
Ig5770_scaffold_101_8
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(12301..13032)
DNA (732bp) protein (244aa)
Prephenate dehydrogenase id=4691626 bin=GWA2__Bacteriovorax-rel_49_15 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
putative prephenate dehydrogenase
Tax=GWA2_Bdellovibrionales_49_15_curated
Ig5770_scaffold_101_9
Psychroflexus gondwanensis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13029..13331)
DNA (303bp) protein (101aa)
Chorismate mutase I /2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WX53_9FLAO
Chorismate mutase I /2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase {ECO:0000313|EMBL:EMY81714.1}; TaxID=1189619 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus gondwanensis ACAM 44.;"
chorismate mutase I/2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase
Ig5770_scaffold_101_10
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13375..14148)
DNA (774bp) protein (258aa)
Uncharacterized protein id=4249606 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_16_Desulfobacca_58_9_curated
Ig5770_scaffold_101_11
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(14170..14979)
DNA (810bp) protein (270aa)
Putative uncharacterized protein id=4162367 bin=GWF2_Lentisphaerae_49_21 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=RBG_13_Planctomycetes_44_8b_curated
Ig5770_scaffold_101_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15006..17846)
DNA (2841bp) protein (947aa)
UvrABC system protein A id=3410179 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
uvrA; excinuclease ATPase subunit A
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_101_13
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

17974..18771
DNA (798bp) protein (266aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Ig5770_scaffold_101_14
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18799..19692)
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=2982185 bin=GWF2_Ignavibacteria_35_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
Ig5770_scaffold_101_15
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(19836..20138)
DNA (303bp) protein (101aa)
Putative nucleotidyltransferase n=1 Tax=Thermus oshimai JL-2 RepID=K7QV62_THEOS
putative nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:AFV76286.1}; Flags: Precursor;; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-2.;"
Ig5770_scaffold_101_16
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(20209..21126)
DNA (918bp) protein (306aa)
Uncharacterized protein id=3410181 bin=GWA2_Ignavibacteria_55_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
Ig5770_scaffold_101_17

Not on your lists

comp(21126..21647)
DNA (522bp) protein (174aa)
Uncharacterized protein id=3410184 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ05905.1}; TaxID=455501 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_001A02.;"
hypothetical protein
Ig5770_scaffold_101_18
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(21677..22579)
DNA (903bp) protein (301aa)
Asparaginase {ECO:0000313|EMBL:ABX05149.1}; EC=3.5.1.1 {ECO:0000313|EMBL:ABX05149.1};; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Asparaginase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZK5_HERA2
asparaginase
Ig5770_scaffold_101_19
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22893..24446)
DNA (1554bp) protein (518aa)
Multiheme c-type cytochrome n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZXT6_MELRP
multiheme c-type cytochrome
Tax=BJP_IG2102_Ignavibacteriales_35_8
Ig5770_scaffold_101_20
unknown

Not on your lists

24583..24810
DNA (228bp) protein (76aa)

This feature has no annotations

Ig5770_scaffold_101_21
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(24707..27346)
DNA (2640bp) protein (880aa)
ATP-dependent Clp protease ATP-binding subunit id=4193973 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
clpB; ATP-dependent Clp protease ATP-binding subunit
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_101_22
unknown

Not on your lists

comp(27356..28336)
DNA (981bp) protein (327aa)

This feature has no annotations

Ig5770_scaffold_101_23
unknown

Not on your lists

comp(28333..28569)
DNA (237bp) protein (79aa)

This feature has no annotations

Ig5770_scaffold_101_24
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(28587..30530)
DNA (1944bp) protein (648aa)
Chaperone protein DnaK id=4194025 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Molecular chaperone DnaK
Tax=GWA2_Ignavibacteria_54_16_curated
Ig5770_scaffold_101_25
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(30627..31058)
DNA (432bp) protein (144aa)
Molecular chaperone (Small heat shock protein) n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YYK4_MELRP
Molecular chaperone (small heat shock protein)
Tax=RBG_16_Ignavibacteria_34_14_curated
Ig5770_scaffold_101_26
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

31400..32179
DNA (780bp) protein (260aa)
Biotin/acetyl-CoA-carboxylase ligase id=4194028 bin=GWC2_Ignavibacteria_56_12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
BirA; biotin-(acetyl-CoA carboxylase) ligase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Ig5770_scaffold_101_27
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

32191..32964
DNA (774bp) protein (258aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXP8_9BACT
Tax=GWA2_Ignavibacteria_54_16_curated
Ig5770_scaffold_101_28
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(32973..33617)
DNA (645bp) protein (215aa)
Transcriptional regulatory protein uhpA id=3948716 bin=GWF2_Melioribacter_38_21 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
LuxR family transcriptional regulator
Tax=RBG_16_Ignavibacteria_34_14_curated
Ig5770_scaffold_101_29
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(33674..34720)
DNA (1047bp) protein (349aa)
Histidine kinase id=4406623 bin=GWC2_Ignavibacteria_38_9 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
liaS; NarL family signal transduction histidine kinase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Ig5770_scaffold_101_30
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(34739..35836)
DNA (1098bp) protein (366aa)
Serine phosphatase id=2231378 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sodium/solute symporter serine/threonine phosphatase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Displaying items 1-30 of 76 in total

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