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Ig5770_scaffold_258

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_258_1
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

160..1242
DNA (1083bp) protein (361aa)
BNR/Asp-box repeat protein id=4762431 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
BNR/Asp-box repeat-containing protein
Tax=CG_Ignavi_02
Ig5770_scaffold_258_2
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1239..2120
DNA (882bp) protein (294aa)
BNR/Asp-box repeat protein id=4260272 bin=GWA2_Ignavibacteria_55_11 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
two component regulator propeller domain-containing protein
Tax=RBG_16_Ignavibacteria_35_7_curated
Ig5770_scaffold_258_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2397..3137
DNA (741bp) protein (247aa)
id=1879612 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Tax=GWE2_Bacteroidetes_42_39_curated
Ig5770_scaffold_258_4
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3371..4444
DNA (1074bp) protein (358aa)
Putative nucleotide-binding protein containing TIR-like domain n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HBG8_METFS rbh
putative nucleotide-binding protein containing TIR-like domain rbh
Putative nucleotide-binding protein containing TIR-like domain {ECO:0000313|EMBL:AGB02092.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Ig5770_scaffold_258_5
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

4630..5472
DNA (843bp) protein (281aa)
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Ig5770_scaffold_258_6
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5639..7627
DNA (1989bp) protein (663aa)
Uncharacterized protein id=3771494 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
Ig5770_scaffold_258_7

Not on your lists

7813..8472
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CPR4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD88017.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Ig5770_scaffold_258_8
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8662..9438
DNA (777bp) protein (259aa)
Beta-lactamase domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSJ3_OPITP
beta-lactamase domain-containing protein
Tax=RBG_13_Ignavibacteria_36_8_curated
Ig5770_scaffold_258_9
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

9569..11482
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3FDA3
TPR domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
Ig5770_scaffold_258_10
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(11498..12505)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000346EE04
glycoside hydrolase family 2 protein
Tax=RBG_16_RIF03_38_11_curated
Ig5770_scaffold_258_11
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12509..13360)
DNA (852bp) protein (284aa)
glycosyl transferase family 2
Putative glycosyltransferase id=3587779 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Ig5770_scaffold_258_12
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13443..14204)
DNA (762bp) protein (254aa)
Glycosyl transferase family 2 id=4766698 bin=GWA2_Elusimicrobia_69_24 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
family 2 glycosyl transferase
Tax=GWA2_Elusimicrobia_69_24_curated
Ig5770_scaffold_258_13
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14201..17047)
DNA (2847bp) protein (949aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN35071.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Glycosyl transferase family 2 id=3778030 bin=GWA2_Planctomycetia_40_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
putative Glycosyl transferase, family 2 rbh
Ig5770_scaffold_258_14
unknown

Not on your lists

comp(17044..17535)
DNA (492bp) protein (164aa)

This feature has no annotations

Ig5770_scaffold_258_15
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17561..18955)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E461_FLESM
Uncharacterized protein {ECO:0000313|EMBL:KJR40874.1}; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candidatus Magnetoovum chiemensis.;"
hypothetical protein
Ig5770_scaffold_258_16
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

comp(18952..19683)
DNA (732bp) protein (244aa)
ABC transporter-related protein id=2888370 bin=GWC1_CPR2_39_9 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
ABC transporter-related protein {ECO:0000313|EMBL:KKQ94457.1}; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
putative ABC-type transport system, ATPase component
Ig5770_scaffold_258_17
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(19684..20457)
DNA (774bp) protein (258aa)
polysaccharide ABC transporter permease; K01992 ABC-2 type transport system permease protein id=5094941 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Polysaccharide ABC transporter permease, ABC-2 type transport system permease protein {ECO:0000313|EMBL:KKP37822.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
polysaccharide ABC transporter permease
Ig5770_scaffold_258_18
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20454..21326)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002E5524F
Glycosyl transferase {ECO:0000313|EMBL:BAQ61826.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
putative glycosyltransferase
Ig5770_scaffold_258_19
unknown

Not on your lists

comp(21648..22454)
DNA (807bp) protein (269aa)

This feature has no annotations

Ig5770_scaffold_258_20
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22960..24042)
DNA (1083bp) protein (361aa)
Putative GTPase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0API3_IGNAJ
GTPase
Putative GTPase {ECO:0000313|EMBL:AFH50890.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Ig5770_scaffold_258_21
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(24460..26031)
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000367F3FA
Sulphatase-modifying factor protein {ECO:0000313|EMBL:EHO40336.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Ig5770_scaffold_258_22
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(26142..29675)
DNA (3534bp) protein (1178aa)
Uncharacterized protein id=2289847 bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
Ig5770_scaffold_258_23
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

29872..31863
DNA (1992bp) protein (664aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036F0EA6
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDY81821.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
ABC transporter
Ig5770_scaffold_258_24
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

31936..32700
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA83_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63424.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
Ig5770_scaffold_258_25
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(32737..33300)
DNA (564bp) protein (188aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase id=2873700 bin=GWF2_Ignavibacteria_35_20 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
trpG; anthranilate synthase component II
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
Ig5770_scaffold_258_26
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

33345..34319
DNA (975bp) protein (325aa)
Anthranilate/para-aminobenzoate synthase component I id=2995990 bin=GWC1_Spirochaetes_27_15 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
TrpE protein
Tax=GWD1_Spirochaetes_27_9_curated
Ig5770_scaffold_258_27
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

34303..34896
DNA (594bp) protein (198aa)
4-amino-4-deoxychorismate lyase id=2873711 bin=GWF2_Ignavibacteria_35_20 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Bacteroid_01
Ig5770_scaffold_258_28
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

35011..36906
DNA (1896bp) protein (632aa)
Putative dipeptidyl anminopeptidase id=3258338 bin=GWB1_CP_36_13 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
putative peptidase
Tax=RBG_16_Zixibacteria_43_9_curated
Ig5770_scaffold_258_29
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

37096..38403
DNA (1308bp) protein (436aa)
modification methylase MjaI (EC:2.1.1.113)
Modification methylase MjaI n=1 Tax=uncultured prokaryote RepID=H5SPY5_9ZZZZ
Tax=RBG_16_Ignavibacteria_34_14_curated
Ig5770_scaffold_258_30
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

38417..39007
DNA (591bp) protein (197aa)
type II restriction enzyme MjaI (EC:3.1.21.4)
Type II restriction enzyme MjaI {ECO:0000313|EMBL:ACI20757.1}; EC=3.1.21.4 {ECO:0000313|EMBL:ACI20757.1};; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
Type II restriction enzyme MjaI n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJE5_THEYD
Displaying items 1-30 of 40 in total

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