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Ig5770_scaffold_3537

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_3537_1
unknown

Not on your lists

113..391
DNA (279bp) protein (93aa)

This feature has no annotations

Ig5770_scaffold_3537_2
unknown

Not on your lists

418..630
DNA (213bp) protein (71aa)

This feature has no annotations

Ig5770_scaffold_3537_3
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(830..1054)
DNA (225bp) protein (75aa)
YcfA family protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RD32_METP4
YcfA family protein
Tax=CG_Nitrosp_01
Ig5770_scaffold_3537_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1047..1259)
DNA (213bp) protein (71aa)
Uncharacterized protein family UPF0150 n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KCZ72506.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
Ig5770_scaffold_3537_5
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(1542..2585)
DNA (1044bp) protein (348aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=18248319 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
preprotein translocase subunit SecY
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_3537_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(2699..2944)
DNA (246bp) protein (82aa)
Protein translocase subunit SecY n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=A6UWW1_META3
preprotein translocase subunit SecY
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_3537_7
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

3140..3709
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Helicobacter macacae MIT 99-5501 RepID=V8C7I2_9HELI
hypothetical protein
Tax=CG_Bacteroid_01
Ig5770_scaffold_3537_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3712..4512)
DNA (801bp) protein (267aa)
modification methylase (EC:2.1.1.-) rbh
Modification methylase n=2 Tax=Helicobacter cinaedi RepID=I7GZP6_9HELI rbh
Tax=RBG_13_Pacearchaeota_36_9_curated
Ig5770_scaffold_3537_9
unknown

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4953..5156
DNA (204bp) protein (68aa)

This feature has no annotations

Ig5770_scaffold_3537_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

5280..6047
DNA (768bp) protein (256aa)
Rhomboid family protein; K07059 id=18248168 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rhomboid family protein
Tax=AR5
Ig5770_scaffold_3537_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


6089..7000
DNA (912bp) protein (304aa)
Diphthamide biosynthesis protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHY5_9EURY
diphthine synthase, DPH2 subunit
Tax=RBG_13_Bathyarchaeota_46_16b_curated
Ig5770_scaffold_3537_12
unknown

Not on your lists

comp(6995..7237)
DNA (243bp) protein (81aa)

This feature has no annotations

Ig5770_scaffold_3537_13
unknown

Not on your lists

comp(7243..7524)
DNA (282bp) protein (94aa)

This feature has no annotations

Ig5770_scaffold_3537_14

Not on your lists

7633..8169
DNA (537bp) protein (179aa)
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5047515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein {ECO:0000313|EMBL:KHO45724.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Transcriptional regulator
Ig5770_scaffold_3537_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(8176..8397)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MPY6_9EURY
YcfA family protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Ig5770_scaffold_3537_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8445..8669)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71928.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein id=5046601 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Ig5770_scaffold_3537_17
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

8889..9098
DNA (210bp) protein (70aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_3537_18
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


9135..9593
DNA (459bp) protein (153aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5040439 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
nusG; transcription antitermination protein NusG
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_3537_19
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists


9860..10366
DNA (507bp) protein (169aa)
50S ribosomal protein L11 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL11_METKA
rpl11p; 50S ribosomal protein L17
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC; 100938).;"
Ig5770_scaffold_3537_20
unknown

Not on your lists

10418..10981
DNA (564bp) protein (188aa)

This feature has no annotations

Ig5770_scaffold_3537_21
unknown

Not on your lists

comp(10990..11214)
DNA (225bp) protein (75aa)

This feature has no annotations

Ig5770_scaffold_3537_22
unknown

Not on your lists

comp(11947..12381)
DNA (435bp) protein (145aa)

This feature has no annotations

Ig5770_scaffold_3537_23
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

12584..13153
DNA (570bp) protein (190aa)
TATA-box-binding protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBY9_9EURY
transcription factor
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_3537_24
unknown

Not on your lists

comp(13163..13585)
DNA (423bp) protein (141aa)

This feature has no annotations

Ig5770_scaffold_3537_25
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


comp(13622..14191)
DNA (570bp) protein (190aa)
Ribosomal protein S3AE n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HHT1_ACIS0
ribosomal protein S3AE
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_3537_26
unknown

Not on your lists

comp(14469..15083)
DNA (615bp) protein (205aa)

This feature has no annotations

Ig5770_scaffold_3537_27
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(15117..16382)
DNA (1266bp) protein (422aa)
Single-stranded DNA-specific exonuclease n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNC5_ACIS0
single-stranded DNA-specific exonuclease
Tax=RBG_16_Micrarchaeota_36_9_curated
Displaying 27 items

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