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Ig5770_scaffold_345

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_345_1
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..118
DNA (117bp) protein (39aa)
transposase ISRSO5, partial n=1 Tax=Mycobacterium abscessus RepID=UPI00037E1D33
Transposase {ECO:0000313|EMBL:EWT02868.1}; Flags: Fragment;; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
transposase
Ig5770_scaffold_345_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(306..560)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K858_NITWC
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
Ig5770_scaffold_345_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(535..786)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DYE2_THIND
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
Ig5770_scaffold_345_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

998..1228
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZTB3_9RHOO
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
Ig5770_scaffold_345_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

1225..1641
DNA (417bp) protein (139aa)
Ribonuclease VapC n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RWE0_ALLVD
PilT protein domain protein
Tax=RBG_16_RIF_CHLX_72_14_curated
Ig5770_scaffold_345_6
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1725..2147)
DNA (423bp) protein (141aa)
Tax=RBG_16_RIF_CHLX_70_13_curated
Ig5770_scaffold_345_7
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

2220..2510
DNA (291bp) protein (97aa)
Tax=RBG_16_RIF_CHLX_70_13_curated
Ig5770_scaffold_345_8
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

2507..2851
DNA (345bp) protein (115aa)
Tax=RBG_16_RIF_CHLX_70_13_curated
Ig5770_scaffold_345_9
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2976..3278
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI000378C284
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Ig5770_scaffold_345_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3294..3806
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00035D6F1C
FIG001353: Acetyltransferase {ECO:0000313|EMBL:CDP51767.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
Ig5770_scaffold_345_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3929..4330)
DNA (402bp) protein (134aa)
Putative uncharacterized protein id=4341235 bin=GWF2_Methylomirabilis_70_14 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Ig5770_scaffold_345_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4334..4588)
DNA (255bp) protein (85aa)
id=4341237 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Ig5770_scaffold_345_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4689..5321)
DNA (633bp) protein (211aa)
DNA polymerase beta domain protein region id=3568484 bin=GWC2_Chloroflexi_73_18 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
DNA polymerase beta domain-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
Ig5770_scaffold_345_14
unknown

Not on your lists

comp(5373..5984)
DNA (612bp) protein (204aa)

This feature has no annotations

Ig5770_scaffold_345_15
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5981..7294)
DNA (1314bp) protein (438aa)
GTPase HflX id=3568485 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative GTPase
Tax=RBG_16_RIF_CHLX_72_14_curated
Ig5770_scaffold_345_16
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7379..8401)
DNA (1023bp) protein (341aa)
tRNA dimethylallyltransferase id=3568488 bin=GWC2_Chloroflexi_73_18 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
miaA; tRNA dimethylallyltransferase
Tax=RBG_16_RIF_CHLX_70_13_curated
Ig5770_scaffold_345_17
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8415..10082)
DNA (1668bp) protein (556aa)
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA id=14628817 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
Tax=RBG_16_RIF_CHLX_70_13_curated
Ig5770_scaffold_345_18
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(10079..11002)
DNA (924bp) protein (308aa)
PHP domain protein id=3568657 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PHP domain-containing protein
Tax=RBG_16_RIF_CHLX_70_13_curated
Ig5770_scaffold_345_19
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11002..11784)
DNA (783bp) protein (261aa)
ymdB; putative hydrolase involved in biofilm formation id=14628819 bin=bin8_Chloro species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
metallophosphoesterase
Tax=RBG_16_RIF_CHLX_72_14_curated
Ig5770_scaffold_345_20
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

11930..12451
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PP45_9ACTO
flavodoxin/nitric oxide synthase
Tax=RBG_16_RIF_CHLX_72_14_curated
Ig5770_scaffold_345_21
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12473..14005)
DNA (1533bp) protein (511aa)
metal dependent phosphohydrolase; K06950 uncharacterized protein id=14628820 bin=bin8_Chloro species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
2,3 cyclic-nucleotide 2-phosphodiesterase
Tax=RBG_16_RIF_CHLX_72_14_curated
Ig5770_scaffold_345_22
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14290..14877)
DNA (588bp) protein (196aa)
regulatory protein RecX; K03565 regulatory protein id=14628821 bin=bin8_Chloro species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
regulatory protein RecX
Tax=RBG_16_RIF_CHLX_70_13_curated
Ig5770_scaffold_345_23
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


comp(14933..16000)
DNA (1068bp) protein (356aa)
hypothetical protein; K03553 recombination protein RecA id=14628822 bin=bin8_Chloro species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
recA; recombination protein RecA
Tax=RBG_16_RIF_CHLX_70_13_curated
Ig5770_scaffold_345_24
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16068..16229)
DNA (162bp) protein (54aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
Ig5770_scaffold_345_25
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16272..17435)
DNA (1164bp) protein (388aa)
tgt-2; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=14628824 bin=bin8_Chloro species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Tax=RBG_16_RIF_CHLX_72_14_curated
Ig5770_scaffold_345_26
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(17444..18547)
DNA (1104bp) protein (368aa)
Holliday junction DNA helicase subunit RuvB id=14628827 bin=bin8_Chloro species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
ruvB; Holliday junction DNA helicase RuvB
Tax=RBG_16_RIF_CHLX_72_14_curated
Ig5770_scaffold_345_27
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18629..19243)
DNA (615bp) protein (205aa)
Holliday junction ATP-dependent DNA helicase RuvA id=3257121 bin=GWC2_Chloroflexi_73_18 species=Dermacoccus sp. Ellin185 genus=Dermacoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
RuvA; holliday junction resolvasome, DNA-binding subunit
Tax=RBG_16_RIF_CHLX_70_13_curated
Ig5770_scaffold_345_28
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19240..19929)
DNA (690bp) protein (230aa)
Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC id=3257118 bin=GWC2_Chloroflexi_73_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_69_14_curated
Ig5770_scaffold_345_29
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(19926..20675)
DNA (750bp) protein (250aa)
hypothetical protein id=14628830 bin=bin8_Chloro species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
Ig5770_scaffold_345_30
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

20800..22884
DNA (2085bp) protein (695aa)
Elongation factor G id=3257111 bin=GWC2_Chloroflexi_73_18 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
translation elongation factor 2 (EF-2/EF-G)
Tax=RBG_16_RIF_CHLX_70_13_curated
Displaying items 1-30 of 48 in total

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