ggKbase home page

Ig5770_scaffold_618

Search features with annotation key words

Displaying items 1-30 of 38 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_618_1
unknown

Not on your lists

217..2313
DNA (2097bp) protein (699aa)
Elongation factor G id=3619759 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
translation elongation factor G
Ig5770_scaffold_618_2
unknown

Not on your lists

2360..3562
DNA (1203bp) protein (401aa)
Elongation factor Tu id=2173690 bin=GWB2_CP_45_9 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
elongation factor Tu
Ig5770_scaffold_618_3
unknown

Not on your lists


3694..3993
DNA (300bp) protein (100aa)
30S ribosomal protein S10 id=3686039 bin=GWF2_OP3_38_59 species=unknown genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
30S ribosomal protein S10
Ig5770_scaffold_618_4
unknown

Not on your lists


4158..4739
DNA (582bp) protein (194aa)
50S ribosomal protein L3 id=4218983 bin=GWF2_OP3_43_52 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
50S ribosomal protein L3
Ig5770_scaffold_618_5
unknown

Not on your lists


4744..5397
DNA (654bp) protein (218aa)
50S ribosomal protein L4 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL4_CARHZ
rplD; 50S ribosomal protein L4
Ig5770_scaffold_618_6
unknown

Not on your lists


5399..5677
DNA (279bp) protein (93aa)
50S ribosomal protein L23 id=2173684 bin=GWB2_CP_45_9 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
rplW; 50S ribosomal protein L23
Ig5770_scaffold_618_7
unknown

Not on your lists


5697..6530
DNA (834bp) protein (278aa)
50S ribosomal protein L2 id=4218986 bin=GWF2_OP3_43_52 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplB; 50S ribosomal protein L2
Ig5770_scaffold_618_8
unknown

Not on your lists


6534..6821
DNA (288bp) protein (96aa)
30S ribosomal protein S19 id=2173680 bin=GWB2_CP_45_9 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
rpsS; 30S ribosomal protein S19
Ig5770_scaffold_618_9
unknown

Not on your lists


6962..7315
DNA (354bp) protein (118aa)
50S ribosomal protein L22 id=3868572 bin=GWC2_OP3_44_8 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
50S ribosomal protein L22
Ig5770_scaffold_618_10
unknown

Not on your lists


7305..8006
DNA (702bp) protein (234aa)
30S ribosomal protein S3 id=2173676 bin=GWB2_CP_45_9 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
30S ribosomal protein S3
Ig5770_scaffold_618_11
unknown

Not on your lists


8076..8492
DNA (417bp) protein (139aa)
50S ribosomal protein L16 id=3868574 bin=GWC2_OP3_44_8 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
50S ribosomal protein L16
Ig5770_scaffold_618_12
unknown

Not on your lists


8645..8839
DNA (195bp) protein (65aa)
50S ribosomal protein L29 id=2173670 bin=GWB2_CP_45_9 species=Carnobacterium maltaromaticum genus=Carnobacterium taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Ig5770_scaffold_618_13
unknown

Not on your lists


8841..9119
DNA (279bp) protein (93aa)
30S ribosomal protein S17 n=2 Tax=Thermoanaerobacter RepID=D3T4P6_THEIA
30S ribosomal protein S17
Ig5770_scaffold_618_14
unknown

Not on your lists


9116..9484
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=4219000 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
50S ribosomal protein L14
Ig5770_scaffold_618_15
unknown

Not on your lists


9486..9803
DNA (318bp) protein (106aa)
50S ribosomal protein L24 id=2002194 bin=GWB2_CP_45_9 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
50S ribosomal protein L24
Ig5770_scaffold_618_16
unknown

Not on your lists


9810..10373
DNA (564bp) protein (188aa)
50S ribosomal protein L5 id=4219004 bin=GWF2_OP3_43_52 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rplE; 50S ribosomal protein L5
Ig5770_scaffold_618_17
unknown

Not on your lists


10988..11383
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3QZ87_CLOB3
rpsH; ribosomal protein S8
Ig5770_scaffold_618_18
unknown

Not on your lists


11417..11965
DNA (549bp) protein (183aa)
50S ribosomal protein L6 id=4917549 bin=GWC2_Ignavibacteria_56_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
rplF; 50S ribosomal protein L6
Ig5770_scaffold_618_19
unknown

Not on your lists


11981..12349
DNA (369bp) protein (123aa)
50S ribosomal protein L18 id=3685959 bin=GWF2_OP3_38_59 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
rplR; 50S ribosomal protein L18
Ig5770_scaffold_618_20
unknown

Not on your lists


12351..12857
DNA (507bp) protein (169aa)
30S ribosomal protein S5 id=4219013 bin=GWF2_OP3_43_52 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
30S ribosomal protein S5
Ig5770_scaffold_618_21
unknown

Not on your lists


12805..13383
DNA (579bp) protein (193aa)
50S ribosomal protein L15 id=2002108 bin=GWB2_CP_45_9 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
rplO; 50S ribosomal protein L15
Ig5770_scaffold_618_22
unknown

Not on your lists


13367..14737
DNA (1371bp) protein (457aa)
Protein translocase subunit SecY id=2002106 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
secY; preprotein translocase subunit SecY
Ig5770_scaffold_618_23
unknown

Not on your lists

14751..15416
DNA (666bp) protein (222aa)
Adenylate kinase n=2 Tax=Caldicellulosiruptor RepID=KAD_CALBD
adenylate kinase
Ig5770_scaffold_618_24
unknown

Not on your lists

15397..16140
DNA (744bp) protein (248aa)
Methionine aminopeptidase id=5029054 bin=GWA2_OP3_53_43 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
methionine aminopeptidase
Ig5770_scaffold_618_25
unknown

Not on your lists

16176..16397
DNA (222bp) protein (74aa)
translation initiation factor IF-1
Translation initiation factor IF-1 id=2002100 bin=GWB2_CP_45_9 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Ig5770_scaffold_618_26
unknown

Not on your lists


16609..17034
DNA (426bp) protein (142aa)
SSU ribosomal protein S13P id=2002098 bin=GWB2_CP_45_9 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
30S ribosomal protein S13
Ig5770_scaffold_618_27
unknown

Not on your lists


17057..17446
DNA (390bp) protein (130aa)
Ribosomal protein S11 id=4219027 bin=GWF2_OP3_43_52 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
30S ribosomal protein S11
Ig5770_scaffold_618_28
unknown

Not on your lists


17450..18079
DNA (630bp) protein (210aa)
30S ribosomal protein S4 id=2002094 bin=GWB2_CP_45_9 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
30S ribosomal protein S4
Ig5770_scaffold_618_29
unknown

Not on your lists

18602..19594
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=2002093 bin=GWB2_CP_45_9 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Ig5770_scaffold_618_30
unknown

Not on your lists


19598..20164
DNA (567bp) protein (189aa)
50S ribosomal protein L17 id=4262985 bin=GWC2_OP3_44_8 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
50S ribosomal protein L17
Displaying items 1-30 of 38 in total

View Taxonomy