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Ig5770_scaffold_304

Search features with annotation key words

Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_304_1
unknown

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

Ig5770_scaffold_304_2
Chlorella variabilis, Chlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(183..1442)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GHN5_SORC5
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFN50871.1}; TaxID=554065 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella.;" source="Chlorella variabilis (Green alga).;"
Ig5770_scaffold_304_3
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(1449..1763)
DNA (315bp) protein (105aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
Ig5770_scaffold_304_4
unknown

Not on your lists

comp(2061..2699)
DNA (639bp) protein (213aa)

This feature has no annotations

Ig5770_scaffold_304_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2789..4309)
DNA (1521bp) protein (507aa)
Ig domain protein group 2 domain protein
Uncharacterized protein {ECO:0000313|EMBL:BAP58129.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
YD repeat-containing protein id=14424724 bin=bin1_lowGC species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin1_lowGC organism_group=Unknown_CP
Ig5770_scaffold_304_6
unknown

Not on your lists

comp(4850..5557)
DNA (708bp) protein (236aa)

This feature has no annotations

Ig5770_scaffold_304_7
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5802..6173)
DNA (372bp) protein (124aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
Ig5770_scaffold_304_8
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

comp(7572..9476)
DNA (1905bp) protein (635aa)
PKD domain containing protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CSB7_TRURR
PKD domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
Ig5770_scaffold_304_9
unknown

Not on your lists

comp(10053..10373)
DNA (321bp) protein (107aa)

This feature has no annotations

Ig5770_scaffold_304_10
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(10642..11679)
DNA (1038bp) protein (346aa)
Protein RecA id=1915910 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
recA; recombinase A
Tax=RBG_13_RIF_OD1_08_41_18_curated
Ig5770_scaffold_304_11
GWF2_OD1_39_13, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11850..12203)
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04346.1}; TaxID=1618995 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_39_13.;"
Ig5770_scaffold_304_12
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(12193..14361)
DNA (2169bp) protein (723aa)
Cell divisionFtsK/SpoIIIE id=4790083 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
cell division protein FtsK
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
Ig5770_scaffold_304_13
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists


comp(14547..15242)
DNA (696bp) protein (232aa)
50S ribosomal protein L15 id=3423185 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
50S ribosomal protein L15
Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
Ig5770_scaffold_304_14
R_OD1_Yanofskybacteria_43_10b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(15211..15738)
DNA (528bp) protein (176aa)
30S ribosomal protein S5 id=3736726 bin=GWC2_OD1_43_27 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ribosomal protein S5, bacterial/organelle type
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_43_10b_curated
Ig5770_scaffold_304_15
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(15871..19467)
DNA (3597bp) protein (1199aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037A4755
DNA-directed RNA polymerase subunit beta'
Tax=CG_CPR04_01
Ig5770_scaffold_304_16
GWC1_OD1-like_46_13, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(19505..22732)
DNA (3228bp) protein (1076aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036B0EAC
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKU22804.1}; TaxID=1618619 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC1_46_13.;"
Ig5770_scaffold_304_17
unknown

Not on your lists

comp(23585..23869)
DNA (285bp) protein (95aa)

This feature has no annotations

Ig5770_scaffold_304_18
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

24120..25586
DNA (1467bp) protein (489aa)
DNA helicase n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000374E9DF
replicative DNA helicase
Tax=CG_Pacearch_04
Ig5770_scaffold_304_19
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

25628..26254
DNA (627bp) protein (209aa)
recombinase RecR n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039EE036
recombination protein recR
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
Ig5770_scaffold_304_20
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26879..27271)
DNA (393bp) protein (131aa)
50S ribosomal protein L21 n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S8F1_FINMA
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
50S ribosomal protein L21
Ig5770_scaffold_304_21
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(27283..28944)
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036AD766
hypothetical protein
Tax=CG_CPR04_01
Ig5770_scaffold_304_22
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(29018..30406)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000370BA21
Tax=RBG_13_RIF_OD1_08_37_53_curated
Ig5770_scaffold_304_23
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(30465..31514)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003726E5F
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
Ig5770_scaffold_304_24
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(31831..32724)
DNA (894bp) protein (298aa)
Protein translocase subunit SecF id=1744031 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
protein translocase subunit secF
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Ig5770_scaffold_304_25

Not on your lists

comp(32982..34406)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003701DBF
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KKR03137.1}; TaxID=1618962 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
protein-export membrane protein SecD
Ig5770_scaffold_304_26
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

comp(34420..35712)
DNA (1293bp) protein (431aa)
Glutamate dehydrogenase id=5799766 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
GdhA2; glutamate dehydrogenase/leucine dehydrogenase
Tax=CG_CPR10_02
Ig5770_scaffold_304_27

Not on your lists

comp(35713..36624)
DNA (912bp) protein (304aa)
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:KKQ57442.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Alkyl hydroperoxide reductase subunit F id=4168192 bin=GWF2_OP3_43_52 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
trxB-1; putative thioredoxin reductase
Ig5770_scaffold_304_28
GWC2_OD1_44_9, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(36862..37098)
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT83771.1}; TaxID=1618658 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWC2_44_9.;"
Putative glutaredoxin id=3423427 bin=GWA1_ZB2_49_26 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
glutaredoxin-like protein
Ig5770_scaffold_304_29
R_OD1_Uhrbacteria_47_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(37240..37770)
DNA (531bp) protein (177aa)
hypothetical protein id=4501547 bin=GWA2_OP3_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_25_curated
Ig5770_scaffold_304_30
RLO_RIF_OD1_05_38_22, RIF-OD1-5, Parcubacteria, Bacteria

Not on your lists

comp(37966..39156)
DNA (1191bp) protein (397aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000382E03F
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_05_38_22_curated
Displaying items 1-30 of 57 in total

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