ggKbase home page

Ig5770_scaffold_1335

Search features with annotation key words

Displaying items 1-30 of 36 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_1335_1
unknown

Not on your lists

comp(31..540)
DNA (510bp) protein (170aa)
Transposase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QJG2_RALPI
transposase
Ig5770_scaffold_1335_2
unknown

Not on your lists

comp(531..1067)
DNA (537bp) protein (179aa)
DDE family endonuclease n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2Q7R0_9ACTO
Ig5770_scaffold_1335_3
unknown

Not on your lists

comp(1232..1954)
DNA (723bp) protein (241aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000378DBB9
Ig5770_scaffold_1335_4
unknown

Not on your lists

comp(1938..3005)
DNA (1068bp) protein (356aa)
Adenine-specific methyltransferase id=4213603 bin=GWC2_Planctomycetes_45_44 species=Brachyspira hampsonii genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
adenine-specific methyltransferase rbh
Ig5770_scaffold_1335_5
unknown

Not on your lists

comp(3008..3928)
DNA (921bp) protein (307aa)
ter:Tery_3514 hypothetical protein id=133188 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Ig5770_scaffold_1335_6
unknown

Not on your lists

comp(3946..4845)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI00036624AE
Ig5770_scaffold_1335_7
unknown

Not on your lists

comp(4848..5630)
DNA (783bp) protein (261aa)
DNA methylase N-4/N-6 domain protein id=4213599 bin=GWC2_Planctomycetes_45_44 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
DNA methylase N-4/N-6 domain-containing protein
Ig5770_scaffold_1335_8
unknown

Not on your lists

comp(5814..8312)
DNA (2499bp) protein (833aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037C4201
hypothetical protein
Ig5770_scaffold_1335_9
unknown

Not on your lists

comp(8377..8907)
DNA (531bp) protein (177aa)

This feature has no annotations

Ig5770_scaffold_1335_10
unknown

Not on your lists

comp(9020..9853)
DNA (834bp) protein (278aa)

This feature has no annotations

Ig5770_scaffold_1335_11
unknown

Not on your lists

9963..11579
DNA (1617bp) protein (539aa)
Glycosyl transferase family 39 n=1 Tax=uncultured bacterium RepID=K2EBP0_9BACT
hypothetical protein
Ig5770_scaffold_1335_12
unknown

Not on your lists

11718..13349
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH73_SINAD
hypothetical protein
Ig5770_scaffold_1335_13
unknown

Not on your lists

comp(13786..14820)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI0003792159
pyrE; orotate phosphoribosyltransferase
Ig5770_scaffold_1335_14
unknown

Not on your lists

comp(14768..15076)
DNA (309bp) protein (103aa)

This feature has no annotations

Ig5770_scaffold_1335_15
unknown

Not on your lists

comp(15242..16036)
DNA (795bp) protein (265aa)
id=3544010 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Ig5770_scaffold_1335_16
unknown

Not on your lists

comp(16209..17264)
DNA (1056bp) protein (352aa)
methicillin resistance protein id=136897 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Ig5770_scaffold_1335_17
unknown

Not on your lists

comp(17491..18879)
DNA (1389bp) protein (463aa)
degt/dnrj/eryc1/strs aminotransferase id=5090520 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Ig5770_scaffold_1335_18
unknown

Not on your lists

18925..19164
DNA (240bp) protein (80aa)

This feature has no annotations

Ig5770_scaffold_1335_19
unknown

Not on your lists

comp(19173..20732)
DNA (1560bp) protein (520aa)
MurF; UDP-N-acetylmuramyl pentapeptide synthase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] id=5090521 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
UDP-N-acetylmuramyl pentapeptide synthase (EC:6.3.2.10)
Ig5770_scaffold_1335_20
unknown

Not on your lists

comp(20969..21883)
DNA (915bp) protein (305aa)
MhpC4; alpha/beta hydrolase id=5090522 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
alpha/beta hydrolase fold protein
Ig5770_scaffold_1335_21
unknown

Not on your lists

21931..22062
DNA (132bp) protein (44aa)

This feature has no annotations

Ig5770_scaffold_1335_22
unknown

Not on your lists

comp(22153..23652)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C5D03
lysyl-tRNA synthetase
Ig5770_scaffold_1335_23
unknown

Not on your lists

comp(23658..24116)
DNA (459bp) protein (153aa)
Transcription elongation factor GreA id=3012689 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
greA; transcription elongation factor GreA
Ig5770_scaffold_1335_24
unknown

Not on your lists

comp(24260..26179)
DNA (1920bp) protein (640aa)
cell elongation specific D,D-transpeptidase; K05515 penicillin-binding protein 2 id=138756 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
mrdA; peptidoglycan transpeptidase
Ig5770_scaffold_1335_25
unknown

Not on your lists

comp(26145..26672)
DNA (528bp) protein (176aa)

This feature has no annotations

Ig5770_scaffold_1335_26
unknown

Not on your lists

comp(26679..27473)
DNA (795bp) protein (265aa)
Cell shape-determining protein MreC n=1 Tax=uncultured bacterium RepID=K2F740_9BACT
mreC; cell shape-determining protein MreC
Ig5770_scaffold_1335_27
unknown

Not on your lists

comp(27506..28558)
DNA (1053bp) protein (351aa)
rca:Rcas_1670 rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=136750 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
MreB/Mrl family cell shape determining protein
Ig5770_scaffold_1335_28
unknown

Not on your lists

comp(28609..28740)
DNA (132bp) protein (44aa)

This feature has no annotations

Ig5770_scaffold_1335_29
unknown

Not on your lists

comp(29037..30155)
DNA (1119bp) protein (373aa)
Membrane-associated zinc metalloprotease id=1947693 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
membrane-associated zinc metalloprotease
Ig5770_scaffold_1335_30
unknown

Not on your lists

comp(30355..30927)
DNA (573bp) protein (191aa)
ribosome recycling factor n=1 Tax=Staphylococcus lentus RepID=UPI0002E22275
ribosome recycling factor
Displaying items 1-30 of 36 in total

View Taxonomy