ggKbase home page

Ig5770_scaffold_2291

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_2291_1

Not on your lists

366..644
DNA (279bp) protein (93aa)
RelB_DinJ: addiction module antitoxin, RelB id=87068 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56617.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Ig5770_scaffold_2291_2

Not on your lists

654..911
DNA (258bp) protein (86aa)
RelE-like id=87065 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56618.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Ig5770_scaffold_2291_3
R_OD1_Uhrbacteria_51_9, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1044..1262
DNA (219bp) protein (73aa)
Uncharacterized protein id=2110530 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated
Ig5770_scaffold_2291_4
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists


2247..2858
DNA (612bp) protein (204aa)
30S ribosomal protein S2 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003611E1D
30S ribosomal protein S2P
Tax=BJP_IG2158_OD1_28_51
Ig5770_scaffold_2291_5
RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

2999..3637
DNA (639bp) protein (213aa)
Elongation factor Ts n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NIX9_DESTT
tsf; elongation factor Ts (EF-Ts) Tsf
Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
Ig5770_scaffold_2291_6

Not on your lists

3667..4482
DNA (816bp) protein (272aa)
PSP1 domain protein id=96587 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
PSP1 protein {ECO:0000313|EMBL:EKD49777.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Tpl protein
Ig5770_scaffold_2291_7
unknown

Not on your lists

4491..5216
DNA (726bp) protein (242aa)

This feature has no annotations

Ig5770_scaffold_2291_trna_1
unknown

Not on your lists

5336..5407
DNA (72bp)
transferRNA Thr
Ig5770_scaffold_2291_trna_2
unknown

Not on your lists

5541..5624
DNA (84bp)
transferRNA Tyr
Ig5770_scaffold_2291_trna_3
unknown

Not on your lists

5734..5806
DNA (73bp)
transferRNA Thr
Ig5770_scaffold_2291_8

Not on your lists

6113..6652
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003631E68
Uncharacterized protein {ECO:0000313|EMBL:KKR03487.1}; TaxID=1618962 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
Ig5770_scaffold_2291_trna_4
unknown

Not on your lists

7140..7210
DNA (71bp)
transferRNA Trp
Ig5770_scaffold_2291_9
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

7273..7992
DNA (720bp) protein (240aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific id=3013072 bin=GWC1_OD1_38_17 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
UDP pyrophosphate synthase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Ig5770_scaffold_2291_10
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

8134..8760
DNA (627bp) protein (209aa)
L-isoaspartyl protein carboxyl methyltransferase (EC:2.1.1.77)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037526DA
Tax=RBG_13_RIF_OD1_08_37_53_curated
Ig5770_scaffold_2291_11
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

9045..10076
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003737840
aminodeoxychorismate lyase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
Ig5770_scaffold_2291_12
unknown

Not on your lists

10091..10225
DNA (135bp) protein (45aa)

This feature has no annotations

Ig5770_scaffold_2291_13
R_RIF_OD1_06_34_10, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

10367..10582
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037925E1
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_10_curated
Ig5770_scaffold_2291_14
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

10584..11126
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=1 Tax=uncultured bacterium RepID=K1ZI27_9BACT
antitermination protein NusG
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Ig5770_scaffold_2291_15
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

Not on your lists


11259..11690
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036ECFAA
50S ribosomal protein L11 {ECO:0000313|EMBL:KKU48376.1}; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
50S ribosomal protein L11
Ig5770_scaffold_2291_16
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


11886..12578
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=uncultured bacterium RepID=K1Z0S7_9BACT
50S ribosomal protein L1
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
Ig5770_scaffold_2291_17
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

12587..12994
DNA (408bp) protein (136aa)
transmembrane_regions 7..24 id=67279 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=CG_CPR03_03
Ig5770_scaffold_2291_18
GWA2_OP11_nov_40_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

13216..13881
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR75997.1}; TaxID=1618459 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA2_40_8.;"
hypothetical protein id=5085410 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Ig5770_scaffold_2291_19
unknown

Not on your lists

13842..14267
DNA (426bp) protein (142aa)

This feature has no annotations

Ig5770_scaffold_2291_20
unknown

Not on your lists

14288..14686
DNA (399bp) protein (133aa)

This feature has no annotations

Ig5770_scaffold_2291_21
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

14706..14921
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKW48003.1}; TaxID=1618804 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
hypothetical protein
Ig5770_scaffold_2291_22
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

15121..15741
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003600678
PaaX family transcriptional regulator
Tax=CG_CPR10_03
Ig5770_scaffold_2291_23
unknown

Not on your lists

16208..16669
DNA (462bp) protein (154aa)

This feature has no annotations

Ig5770_scaffold_2291_24
R_OD1_Magasanikbacteria_41_13, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

17097..18200
DNA (1104bp) protein (368aa)
Deoxycytidine deaminase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YJY6_MOBAS id=133708 bin=ACD81 species=Aurantimonas manganoxydans genus=Aurantimonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
2-deoxycytidine 5-triphosphate deaminase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_41_13_curated
Ig5770_scaffold_2291_25
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

18288..19781
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037C6CBF
thymidylate synthase
Tax=CG_Woesearch_01
Ig5770_scaffold_2291_26
GWA2_OD1_39_41, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

19763..20449
DNA (687bp) protein (229aa)
tmk; thymidylate kinase Tmk (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=planctomycete KSU-1 RepID=I3IKU6_9PLAN
Thymidylate kinase {ECO:0000313|EMBL:KKR21519.1}; TaxID=1618695 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWA2_39_41.;"
Displaying 30 items

View Taxonomy