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Ig5770_scaffold_3891

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_3891_1
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

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comp(103..984)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) RepID=U9UVX5_RHIID
Uncharacterized protein {ECO:0000313|EMBL:ESA22708.1}; TaxID=747089 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL; 43194) (Arbuscular mycorrhizal fungus) (Glomus intraradices).;"
Ig5770_scaffold_3891_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(1004..1663)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI00031F3CB7
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ABG03785.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Ig5770_scaffold_3891_3

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comp(1660..2070)
DNA (411bp) protein (137aa)
ISXo3 transposase orfB {ECO:0000313|EMBL:KKT26454.1}; Flags: Fragment;; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;"
Ig5770_scaffold_3891_4
R_RIF_OD1_08_43_11, RIF-OD1-8, Parcubacteria, Bacteria

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comp(2115..2480)
DNA (366bp) protein (122aa)
TIS1421-transposase protein A n=2 Tax=Chloroflexus RepID=A9WAL8_CHLAA
transposase IS5-like protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_43_11_curated
Ig5770_scaffold_3891_5
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

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2553..3536
DNA (984bp) protein (328aa)
Recombinase id=2823704 bin=GWC1_OD1_38_17 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
recombinase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
Ig5770_scaffold_3891_6
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(3678..3974)
DNA (297bp) protein (99aa)
seg 14..26 id=8985 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Ig5770_scaffold_3891_7
R_OD1_Moranbacteria_54_31, Moranbacteria, Parcubacteria, Bacteria

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comp(4115..5467)
DNA (1353bp) protein (451aa)
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=8996 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
RNA polymerase, sigma 70 subunit, rpod subfamily
Tax=RIFCSPHIGHO2_01_FULL_OD1_Moranbacteria_54_31_curated
Ig5770_scaffold_3891_8
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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comp(5560..6525)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A638_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKQ18729.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Ig5770_scaffold_3891_9
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

comp(6920..7165)
DNA (246bp) protein (82aa)
Tax=RBG_13_WOR-2_44_8b_curated
Ig5770_scaffold_3891_10
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(7671..8957)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00036E1E4C
putative ATPase (AAA+ superfamily)
Tax=CG_Elusi_03
Ig5770_scaffold_3891_11
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(9092..10915)
DNA (1824bp) protein (608aa)
DNA primase id=2823715 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
DNA primase
Tax=RBG_13_RIF_OD1_07_37_56_curated
Ig5770_scaffold_3891_12
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

Not on your lists

comp(10945..11367)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU48641.1}; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
Vitamin K epoxide reductase id=2824581 bin=GWC1_OD1_38_17 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
Ig5770_scaffold_3891_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(12450..12815)
DNA (366bp) protein (122aa)
id=2899561 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Ig5770_scaffold_3891_14
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(12873..14471)
DNA (1599bp) protein (533aa)
Uncharacterized protein (Fragment) id=2899562 bin=GWA1_ZB2_49_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RBG_13_RIF_OD1_07_42_11_curated
Displaying 14 items

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