ggKbase home page

Ig5770_scaffold_4571

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_4571_1
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..669)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI000381D080
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:KDE39014.1}; TaxID=267850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola lacisaponensis.;"
Multi-sensor hybrid histidine kinase (modular protein)
Ig5770_scaffold_4571_2
unknown

Not on your lists

984..3404
DNA (2421bp) protein (807aa)

This feature has no annotations

Ig5770_scaffold_4571_3
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3512..4012)
DNA (501bp) protein (167aa)
Methyltransferase type 11 n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V965_DESML
Methyltransferase type 11 {ECO:0000313|EMBL:EPR43229.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
hypothetical protein
Ig5770_scaffold_4571_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4438..5055)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003784CD3
hypothetical protein
Tax=CG_Rhodocyc_01
Ig5770_scaffold_4571_5
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5084..6061)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003619F8D
translation factor
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_4571_6
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6054..7181)
DNA (1128bp) protein (376aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfurital
Phosphoribosylaminoimidazole carboxylase, PurK protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLI5_AZOSU
phosphoribosylaminoimidazole carboxylase ATPase subunit
Ig5770_scaffold_4571_7
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7178..7696)
DNA (519bp) protein (173aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLI6_AZOSU
purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_4571_8
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7693..8145)
DNA (453bp) protein (151aa)
Bifunctional protein FolD n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RV52_ACCPU
bifunctional protein FolD
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_4571_9
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8212..8823)
DNA (612bp) protein (204aa)
2-oxoacid:ferredoxin oxidoreductase, gamma subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLI8_AZOSU
indolepyruvate oxidoreductase subunit beta
Indolepyruvate oxidoreductase subunit beta {ECO:0000313|EMBL:BAO30767.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_4571_10
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8831..9736)
DNA (906bp) protein (302aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLI9_AZOSU
indolepyruvate ferredoxin oxidoreductase, alpha subunit
Ig5770_scaffold_4571_11
unknown

Not on your lists

9847..10275
DNA (429bp) protein (143aa)

This feature has no annotations

Ig5770_scaffold_4571_12
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10203..10670)
DNA (468bp) protein (156aa)
Indolepyruvate ferredoxin oxidoreductase,subunit alpha n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P920_AROAE
iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_4571_13
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10913..11398
DNA (486bp) protein (162aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CR71_SIDLE
Crp/Fnr family transcriptional regulator
Tax=RBG_16_Gammaproteobacteria_57_12_curated
Ig5770_scaffold_4571_14
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11452..12996)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00038297E7
multi-sensor hybrid histidine kinase
Tax=CG_Beta_01
Ig5770_scaffold_4571_15
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12981..15098)
DNA (2118bp) protein (706aa)
Multi-sensor hybrid histidine kinase (Modular protein) n=1 Tax=Thauera sp. 27 RepID=N6XR03_9RHOO
Multi-sensor hybrid histidine kinase (Modular protein) {ECO:0000313|EMBL:ENO81770.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
multi-sensor hybrid histidine kinase
Ig5770_scaffold_4571_16
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15820..16920)
DNA (1101bp) protein (367aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y7S3_THIV6 rbh
response regulator containing a CheY-like receiver domain and an HD-GYP domain rbh
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:AFL73041.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
Ig5770_scaffold_4571_17
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16990..18612)
DNA (1623bp) protein (541aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRX7_ACCPU rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=GWA2_Gallionellales_60_142_curated
Ig5770_scaffold_4571_18
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18612..19277)
DNA (666bp) protein (222aa)
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRX6_ACCPU
thiamine pyrophosphate TPP-binding domain-containing protein
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:BAO30750.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_4571_19
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19479..20663
DNA (1185bp) protein (395aa)
id=2520620 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Gamma2_60_9_curated
Ig5770_scaffold_4571_20
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20554..21132)
DNA (579bp) protein (193aa)
pyruvate/ketoisovalerate oxidoreductase subunit gamma (EC:1.2.7.1)
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRX4_ACCPU
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_4571_21
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21342..24032
DNA (2691bp) protein (897aa)
pyruvate dehydrogenase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003808D53
aceE; pyruvate dehydrogenase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_4571_22
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24035..25279
DNA (1245bp) protein (415aa)
aceF; dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
dihydrolipoamide acetyltransferase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037B9F01
Tax=GWA2_Rhodocyclales_65_20_curated
Displaying 22 items

View Taxonomy